PAS/PAC sensor hybrid histidine kinase - Koribacter versatilis (strain Ellin345)

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Q1IM81 (Q1IM81_KORVE) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 45. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
PAS/PAC sensor hybrid histidine kinase EMBL ABF42019.1
EC=2.7.13.3 EMBL ABF42019.1

Gene names

Ordered Locus Names:

Acid345_3018

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	522 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 histidine kinase domain. SAAS SAAS009082

Ontologies

Keywords
Molecular function	Kinase EMBL ABF42019.1 Transferase
PTM	Phosphoprotein SAAS SAAS005467
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	peptidyl-histidine phosphorylation Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro two-component response regulator activity Inferred from electronic annotation. Source: InterPro two-component sensor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q1IM81 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 1BCD1C82ECB5614B
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FASTA

522

57,677

        10         20         30         40         50         60 
MAESRPTRDT VPPSAGSIDP SLYEAVFHNS LDGILIADDD ARYIDVNAAA CEIVGRTRKE 

        70         80         90        100        110        120 
LIGERVGTFV EHPSDAQVLW EKAKQSGTIR AEIAVLRPDG QKRYIEFTAV ANFVPGRHLI 

       130        140        150        160        170        180 
LVRDFTHRRN LDEQIRNASK MEAIGRLAGG VAHDFNNLLM VITSYTELML DSMADFDPLR 

       190        200        210        220        230        240 
KKAQEVLKAS ARAASLTRQL LAFSRKQVLD PQFQDFNILL REMSKLLGRV LGENVEVKLD 

       250        260        270        280        290        300 
LRENLGSVYA DRGQIEQIMM HLAVNARDVM PEGGRFTVRT ANVDFDGSYS RLPGSPPPGE 

       310        320        330        340        350        360 
FVMMSVEDTG NGMSRDVLSH LFEPFFSTKA MGKGTGLGLA AVYGIVKQSG GFIWVDSEEG 

       370        380        390        400        410        420 
HGSRFKMYFP RAVQGKEEQL GRRASFIPET RPAVVLLVED EEALRAAAGD FLETRGYKIM 

       430        440        450        460        470        480 
TARDGTEALS MASKFAERID VLITDLVMPG ISGRVLAQEL VKIHPETKVM YMSGYDDETV 

       490        500        510        520 
MVNGEIDSSS AFLRKPFRMD ALSAKIREVL GEESRSSGSG PT

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References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils."
Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M.

Kuske C.R.
Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF42019.1.
RefSeq	YP_592093.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IM81.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IM81.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4071573.
GenomeReviews	Gene locus Acid345_3018 in contig CP000360_GR.
KEGG	aba:Acid345_3018.
NMPDR	fig\|204669.6.peg.3017.
PATRIC	31983154. VBICanKor57425_3211.
Phylogenomic databases
eggNOG	COG0642.
HOGENOM	HBG334875.
OMA	FNNMLAI.
Family and domain databases
InterPro	IPR003594. ATPase-like_ATP-bd. IPR011006. CheY-like_superfamily. IPR000014. PAS. IPR013656. PAS_4. IPR004358. Sig_transdc_His_kin-like_C. IPR003661. Sig_transdc_His_kin_sub1_dim/P. IPR005467. Sig_transdc_His_kinase_core. IPR009082. Sig_transdc_His_kinase_dimeric. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Gene3D	G3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
Pfam	PF02518. HATPase_c. 1 hit. PF00512. HisKA. 1 hit. PF08448. PAS_4. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
PRINTS	PR00344. BCTRLSENSOR.
SMART	SM00387. HATPase_c. 1 hit. SM00388. HisKA. 1 hit. SM00091. PAS. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF55874. ATP_bd_ATPase. 1 hit. SSF52172. CheY_like. 1 hit. SSF47384. His_kin_homodim. 1 hit.
TIGRFAMs	TIGR00229. Sensory_box. 1 hit.
PROSITE	PS50109. HIS_KIN. 1 hit. PS50112. PAS. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IM81_KORVE

Accession

Primary (citable) accession number: Q1IM81

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	January 25, 2012
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information