Q1IM00 (Q1IM00_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Two component transcriptional regulator, winged helix family EMBL ABF42100.1

Gene names

Ordered Locus Names:

Acid345_3099

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	235 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Two-component regulatory system SAAS SAAS001867
PTM	Phosphoprotein SAAS SAAS001867
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro two-component response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1IM00 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 7EA3C82A65BD8A45	FASTA	235	26,334
	10 20 30 40 50 60 MQSRGTKRFG VRLLVVEDDL AIQEFLKRAL VEAGYQVDVA ADGRTAEKLA TEGIHDGLII 70 80 90 100 110 120 DLGLPDIDGL DLIARTRAQG NSAPVLILSA RRSVDERVRG LEQGGDDYLT KPFALSELLA 130 140 150 160 170 180 RLRNLLRRAS PGQHESTRLR IADLELDLVR REAKRGANVL QLTPQEFALL EYLCRNTGRV 190 200 210 220 230 VTRTMILDHV WKMRIDPATN VVDVHIYRLR SKVDRDAPKA LIHTIRGVGY VLKDS

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF42100.1.
RefSeq	YP_592174.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IM00.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IM00.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4072663.
GenomeReviews	Gene locus Acid345_3099 in contig CP000360_GR.
KEGG	aba:Acid345_3099.
NMPDR	fig|204669.6.peg.3102.
PATRIC	31983328. VBICanKor57425_3298.
Phylogenomic databases
eggNOG	COG0745.
HOGENOM	HBG753323.
PhylomeDB	Q1IM00.
ProtClustDB	CLSK2467710.
Family and domain databases
InterPro	IPR011006. CheY-like_superfamily. IPR001867. Sig_transdc_resp-reg_C. IPR001789. Sig_transdc_resp-reg_receiver. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF00072. Response_reg. 1 hit. PF00486. Trans_reg_C. 1 hit. [Graphical view]
SMART	SM00448. REC. 1 hit. SM00862. Trans_reg_C. 1 hit. [Graphical view]
SUPFAM	SSF52172. CheY_like. 1 hit.
PROSITE	PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IM00_KORVE

Accession

Primary (citable) accession number: Q1IM00

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)