Unreviewed, UniProtKB/TrEMBL Q1IM00 (Q1IM00_ACIBL)

Names and origin

Protein names

Submitted name:
    Two component transcriptional regulator, winged helix family EMBL ABF42100.1

Gene names

Ordered Locus Names:

Acid345_3099

Organism

Acidobacteria bacterium (strain Ellin345) [Complete proteome] [HAMAP]

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Acidobacteriales › Acidobacteriaceae

Protein attributes

Sequence length	235 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 response regulatory domain. Spearmint SPM001867

Ontologies

Keywords
Biological process	Transcription Transcription regulation Spearmint SPM001867 Two-component regulatory system Spearmint SPM001867
Ligand	DNA-binding Spearmint SPM001867
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro two-component signal transduction system (phosphorelay) Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro two-component response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1IM00-1 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 7EA3C82A65BD8A45	FASTA	235	26,334
	10 20 30 40 50 60 MQSRGTKRFG VRLLVVEDDL AIQEFLKRAL VEAGYQVDVA ADGRTAEKLA TEGIHDGLII 70 80 90 100 110 120 DLGLPDIDGL DLIARTRAQG NSAPVLILSA RRSVDERVRG LEQGGDDYLT KPFALSELLA 130 140 150 160 170 180 RLRNLLRRAS PGQHESTRLR IADLELDLVR REAKRGANVL QLTPQEFALL EYLCRNTGRV 190 200 210 220 230 VTRTMILDHV WKMRIDPATN VVDVHIYRLR SKVDRDAPKA LIHTIRGVGY VLKDS

References

[1]

"Complete sequence of Acidobacteria bacterium Ellin345." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Kiss H., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Kuske C., Janssen P.H., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000360 Genomic DNA. Translation: ABF42100.1.
RefSeq	YP_592174.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4072663.
GenomeReviews	Gene locus Acid345_3099 in contig CP000360_GR.
KEGG	aba:Acid345_3099.
NMPDR	fig|204669.6.peg.3102.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q1IM00.
OMA	Q1IM00. LATSTAY.
Family and domain databases
InterPro	IPR001867. Sig_transdc_resp-reg_C. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Pfam	PF00072. Response_reg. 1 hit. PF00486. Trans_reg_C. 1 hit. [Graphical view]
ProDom	PD000039. Response_reg. 1 hit. PD000329. Trans_reg_C. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00448. REC. 1 hit. [Graphical view]
PROSITE	PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IM00_ACIBL

Accession

Primary (citable) accession number: Q1IM00

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	June 16, 2009
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)