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Q1IL20 (Q1IL20_KORVE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Acid345_3429 EMBL ABF42430.1
OrganismKoribacter versatilis (strain Ellin345) [Reference proteome] [HAMAP] EMBL ABF42430.1
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteriaAcidobacteriaCandidatus Koribacter

Protein attributes

Sequence length374 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABF42430.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1IL20 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 2881139B2162B0C5

FASTA37442,263
        10         20         30         40         50         60 
MPRRSAVKKS PKLSDGAVSA EDLKQQFQKL KLPIQPPFPP MEAKLVDAIP EGALWQYEPK 

        70         80         90        100        110        120 
WDGFRCVAFR DGDTVELQSK AGQPLGRYFP EIVEALLKLK PTEFVLDGEI VILRNGHLSF 

       130        140        150        160        170        180 
DDLLMRIHPA ASRIKKLSVE TPATYLVFDL LVDDKAHSLV EETQAARRER LELFFKTFKG 

       190        200        210        220        230        240 
NASVRLSPMT RDHAEAEKWM KKLAVIGFDG VVAKALDQPY QSGERAMRKI KRIRTADCVV 

       250        260        270        280        290        300 
GGFRYASKGG EVGSLLLGVY NDEGQLDHIG FSSSFAREER KQLKKILKPY MNGEGFTGKA 

       310        320        330        340        350        360 
PGGPSRWSTE RTGEWERLDP KLVCEVSYDH FSGGRFRHGT KFLRWRPEKE PKSCTYEQIT 

       370 
PAKQRGSMDQ FLAA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000360 Genomic DNA. Translation: ABF42430.1.
RefSeqYP_592504.1. NC_008009.1.

3D structure databases

ProteinModelPortalQ1IL20.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING204669.Acid345_3429.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF42430; ABF42430; Acid345_3429.
GeneID4070313.
KEGGaba:Acid345_3429.
PATRIC31984050. VBICanKor57425_3656.

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAERTADCV.
OrthoDBEOG63NMFT.
ProtClustDBPRK08224.

Enzyme and pathway databases

BioCycKVER204669:GHL8-3456-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1IL20_KORVE
AccessionPrimary (citable) accession number: Q1IL20
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: April 16, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)