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Q1IL20

- Q1IL20_KORVE

UniProt

Q1IL20 - Q1IL20_KORVE

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Acid345_3429
Organism
Koribacter versatilis (strain Ellin345)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciKVER204669:GHL8-3456-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Acid345_3429Imported
OrganismiKoribacter versatilis (strain Ellin345)Imported
Taxonomic identifieri204669 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaCandidatus Koribacter
ProteomesiUP000002432: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi204669.Acid345_3429.

Structurei

3D structure databases

ProteinModelPortaliQ1IL20.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiPFPPMEA.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1IL20-1 [UniParc]FASTAAdd to Basket

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MPRRSAVKKS PKLSDGAVSA EDLKQQFQKL KLPIQPPFPP MEAKLVDAIP    50
EGALWQYEPK WDGFRCVAFR DGDTVELQSK AGQPLGRYFP EIVEALLKLK 100
PTEFVLDGEI VILRNGHLSF DDLLMRIHPA ASRIKKLSVE TPATYLVFDL 150
LVDDKAHSLV EETQAARRER LELFFKTFKG NASVRLSPMT RDHAEAEKWM 200
KKLAVIGFDG VVAKALDQPY QSGERAMRKI KRIRTADCVV GGFRYASKGG 250
EVGSLLLGVY NDEGQLDHIG FSSSFAREER KQLKKILKPY MNGEGFTGKA 300
PGGPSRWSTE RTGEWERLDP KLVCEVSYDH FSGGRFRHGT KFLRWRPEKE 350
PKSCTYEQIT PAKQRGSMDQ FLAA 374
Length:374
Mass (Da):42,263
Last modified:June 13, 2006 - v1
Checksum:i2881139B2162B0C5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000360 Genomic DNA. Translation: ABF42430.1.
RefSeqiYP_592504.1. NC_008009.1.

Genome annotation databases

EnsemblBacteriaiABF42430; ABF42430; Acid345_3429.
GeneIDi4070313.
KEGGiaba:Acid345_3429.
PATRICi31984050. VBICanKor57425_3656.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000360 Genomic DNA. Translation: ABF42430.1 .
RefSeqi YP_592504.1. NC_008009.1.

3D structure databases

ProteinModelPortali Q1IL20.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 204669.Acid345_3429.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABF42430 ; ABF42430 ; Acid345_3429 .
GeneIDi 4070313.
KEGGi aba:Acid345_3429.
PATRICi 31984050. VBICanKor57425_3656.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222508.
KOi K01971.
OMAi PFPPMEA.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci KVER204669:GHL8-3456-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ellin345Imported.

Entry informationi

Entry nameiQ1IL20_KORVE
AccessioniPrimary (citable) accession number: Q1IL20
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: May 14, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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