Q1IKA5 (Q1IKA5_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
FAD dependent oxidoreductase EMBL ABF42695.1

Gene names

Ordered Locus Names:

Acid345_3694

Organism

Koribacter versatilis (strain Ellin345) [Reference proteome] [HAMAP]

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Fibrobacteres/Acidobacteria group › Acidobacteria › unclassified Acidobacteria › Candidatus Koribacter › Candidatus Koribacter versatilis

Protein attributes

Sequence length	550 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. RuleBase RU003891

Ontologies

Keywords
Molecular function	Oxidoreductase SAAS SAAS006076
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	glycerol-3-phosphate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	glycerol-3-phosphate dehydrogenase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	glycerol-3-phosphate dehydrogenase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1IKA5 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 37A69A69BEC2BF6D	FASTA	550	59,519
	10 20 30 40 50 60 MVFAHLTLCM GVSTCVRAPI PAKRFDVVVI GGGIVGVAIA RTTALAGKST LLLEQHDFAS 70 80 90 100 110 120 GATCRGPRIV GDVFSDLERG DFAIARETLR ERDRLLVERP HLVRPMTGII ALGAESRRSK 130 140 150 160 170 180 LEVRFGLWLR RRLGNASQWR PNDAEIDLAK QALGPQRAAS VFAFDDATCD FPERLVAEWL 190 200 210 220 230 240 REAVAAGAIA RNYCRALEVV VKDGTAVGVR TRDLCTDMEQ EINAEWVVNA TGPFAEQFCS 250 260 270 280 290 300 DSHIETPRTI APLRAIHLAL QRFPAAPEAT IHFEGVDGNE VMLSPWNGQL LLSAVRPNSN 310 320 330 340 350 360 ALPFAGPSEA EQDYLRLSLN SILPGVEIRV NTAFAAPVAA FGEGALESPG ERNRSLVLNH 370 380 390 400 410 420 PGTGKFLTVI SGSLTASAFA VAECGRQLGL RTRPDSECVY LPGRGNGIEA TLQHWAHAVA 430 440 450 460 470 480 SSSRIPERVA RSIAAWHGRG ALCIARLAAG NAELRTTLCP HTDHIVAEAI DAVRYEGALT 490 500 510 520 530 540 LADILMRRLP VALSSCWSEE CTRTAAQRIG KWMNWSAAQN DLQVECVEAE RAAFLVKPGP 550 LRDLSDQLAA

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF42695.1.
RefSeq	YP_592769.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IKA5.
ModBase	Search...
Protein-protein interaction databases
STRING	204669.Acid345_3694.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF42695; ABF42695; Acid345_3694.
GeneID	4070444.
KEGG	aba:Acid345_3694.
PATRIC	31984624. VBICanKor57425_3942.
Phylogenomic databases
eggNOG	COG0578.
KO	K00111.
Enzyme and pathway databases
BioCyc	KVER204669:GHL8-3723-MONOMER.
Family and domain databases
InterPro	IPR006076. FAD-dep_OxRdtase. IPR000447. G3P_DH_FAD-dep. [Graphical view]
Pfam	PF01266. DAO. 1 hit. [Graphical view]
PRINTS	PR01001. FADG3PDH.
ProtoNet	Search...

Entry information

Entry name

Q1IKA5_KORVE

Accession

Primary (citable) accession number: Q1IKA5

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	May 29, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)