Q1IJV7 (Q1IJV7_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase EMBL ABF42843.1

Gene names

Ordered Locus Names:

Acid345_3843

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	472 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1IJV7 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: B98FF89A42AE5682	FASTA	472	50,674
	10 20 30 40 50 60 MASERARQIL YSAAVAIFVF ASVWVGLTLT RGEDRVAAIW LSNGVLVVLL LSKGKTPTLP 70 80 90 100 110 120 LVMIGFLANL LANRVAGDQW LQASSLAAIN ALEVVIAYAL LTRRGREVDL RDPSGLGRFV 130 140 150 160 170 180 LWGAIVAPLI CSLLGTTVVV ASRGGDFQAT LRVWFLADAL GMAVIAPVLF VFLKDHVLTE 190 200 210 220 230 240 LFGREKLGGT ALMLLLLGLS LAVVFSQSRL PLLFLVFPVL VLAVFKRGFA GAALAVVTIA 250 260 270 280 290 300 AIGVIGAVKG FGPITIGSGN AFTDRVLLLQ AYLACVVATS FPLAAVLGER DRLHERLTGL 310 320 330 340 350 360 VYVDWLTDLP NRRHFDMRFN SEWRRAMRSR MPISLMMIDV DQFKEYNDAY GHMAGDRCLA 370 380 390 400 410 420 KLGSVMAASV KRSADFVARY GGEEFVVILP ETTATGAGIV AANVMEAVAA LELPHAGSPH 430 440 450 460 470 KQVSVSVGIA YAHPDIGAEP SELVRSADRA LYTAKRDGRN CVRVALEQTT SA

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF42843.1.
RefSeq	YP_592917.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IJV7.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IJV7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4070995.
GenomeReviews	Gene locus Acid345_3843 in contig CP000360_GR.
KEGG	aba:Acid345_3843.
NMPDR	fig|204669.6.peg.3830.
PATRIC	31984932. VBICanKor57425_4094.
Phylogenomic databases
eggNOG	COG2199.
OMA	ERICIMM.
PhylomeDB	Q1IJV7.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR007895. MASE1. [Graphical view]
Pfam	PF00990. GGDEF. 1 hit. PF05231. MASE1. 1 hit. [Graphical view]
SMART	SM00267. GGDEF. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit.
PROSITE	PS50887. GGDEF. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IJV7_KORVE

Accession

Primary (citable) accession number: Q1IJV7

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)