Q1IJD6 (Q1IJD6_KORVE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase family 1 EMBL ABF43014.1

Gene names

Ordered Locus Names:

Acid345_4014

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABF43014.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1IJD6 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 2BFF001655F4FD9A	FASTA	443	50,252
	10 20 30 40 50 60 MVSFPPGFQW GVSTSAHQFE GGNVHNQWHE WEARGRIRSG DKCGFACNWW HEAEEDLDRA 70 80 90 100 110 120 HDLGLNVMRL SLEWSRLEPK PGKWDKAAAR RYREIFKAVR SRGMRIFTSL HHFTHPLWFE 130 140 150 160 170 180 YKGAFTSKEG PKLFNYFAER VITEFGDLCT DWVTFNEPNV YAAFGYMFGE FPPGRINDLQ 190 200 210 220 230 240 AGMAALIGAH RAHALAYDTI HRLQSDAGVG IAVNYVVFRA ATASLSDRML ARVYDAAFNR 250 260 270 280 290 300 STLSFLKTGS MPGTMSVLAG RVPEAVGKID FIGLNIYNRL HVRWPKAQDK AGGIFVPPDV 310 320 330 340 350 360 PQGDHGVELP YGEAFPDGVI PAVEVYSELK KPIYILENGV PDRTDRIRPW VIVKTLQNIS 370 380 390 400 410 420 DLIQRGYDIR GYFHWSLVDN FEWNEGWKLR FGLFEVDPRT QKRSPRLSAR LYRDIVTQNA 430 440 ISDATLEHFG KLPATKNGSS VAP

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF43014.1.
RefSeq	YP_593088.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IJD6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IJD6.
Protein family/group databases
CAZy	GH1. Glycoside Hydrolase Family 1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4071150.
GenomeReviews	Gene locus Acid345_4014 in contig CP000360_GR.
KEGG	aba:Acid345_4014.
NMPDR	fig|204669.6.peg.3998.
PATRIC	31985322. VBICanKor57425_4286.
Phylogenomic databases
eggNOG	COG2723.
HOGENOM	HBG316462.
OMA	WHEWEAR.
Family and domain databases
InterPro	IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10353. Glyco_hydro_1. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 1 hit. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1IJD6_KORVE

Accession

Primary (citable) accession number: Q1IJD6

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)