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Q1IHW2 (PTH_KORVE) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Peptidyl-tRNA hydrolase
Short name=PTH
EC=3.1.1.29
Gene names
Name:pth
Ordered Locus Names:Acid345_4538
OrganismKoribacter versatilis (strain Ellin345)
Taxonomic identifier204669 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length201 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00083

Catalytic activity

N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00083

Subunit structure

Monomer By similarity. HAMAP MF_00083

Subcellular location

Cytoplasm By similarity HAMAP MF_00083.

Sequence similarities

Belongs to the PTH family.

Sequence caution

The sequence ABF43538.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Cellular componentCytoplasm
   Molecular functionHydrolase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionaminoacyl-tRNA hydrolase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 201201Peptidyl-tRNA hydrolase HAMAP MF_00083
PRO_0000263999

Sequences

Sequence LengthMass (Da)Tools
Q1IHW2 [UniParc].

Last modified December 12, 2006. Version 2.
Checksum: 3D2190B47B318F48

FASTA20121,691
        10         20         30         40         50         60 
MKLIVGLGNP GMQYQFTPHN LGFLAVDRIA EKYGIRVANR NCKALTGRGV IEGVDVVLAK 

        70         80         90        100        110        120 
PETYMNLSGA SVQELVSELE IDGTKDMIVI YDDLDLPYGS IRVRERGSAG GHNGVQSIIG 

       130        140        150        160        170        180 
ALDTQEFLRI RIGIAPEFKL SDGASYVLSQ LKKSQLPVVD QALDDAAEAV KVILREGPGP 

       190        200 
AMNRFNRKPE PPESGGEVAA K

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000360 Genomic DNA. Translation: ABF43538.1. Different initiation.
RefSeqYP_593612.1. NC_008009.1.

3D structure databases

ProteinModelPortalQ1IHW2.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1IHW2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4070216.
GenomeReviewsGene locus Acid345_4538 in contig CP000360_GR.
KEGGaba:Acid345_4538.
NMPDRfig|204669.6.peg.4515.
PATRIC31986473. VBICanKor57425_4849.

Phylogenomic databases

eggNOGCOG0193.
HOGENOMHBG610927.
ProtClustDBPRK05426.

Enzyme and pathway databases

BioCycABAC204669:ACID345_4538-MONOMER.

Family and domain databases

HAMAPMF_00083. Pept_tRNA_hydro_bact.
[Tree]
InterProIPR001328. Pept_tRNA_hydro.
[Graphical view]
Gene3DG3DSA:3.40.50.1470. Pept_tRNA_hydro. 1 hit.
KOK01056.
PANTHERPTHR17224. Pept_tRNA_hydro. 1 hit.
PfamPF01195. Pept_tRNA_hydro. 1 hit.
[Graphical view]
SUPFAMSSF53178. Pept_tRNA_hydro. 1 hit.
TIGRFAMsTIGR00447. Pth. 1 hit.
PROSITEPS01195. PEPT_TRNA_HYDROL_1. False negative.
PS01196. PEPT_TRNA_HYDROL_2. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry namePTH_KORVE
AccessionPrimary (citable) accession number: Q1IHW2
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: December 12, 2006
Last modified: January 25, 2012
This is version 33 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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