Q1IHH2 (RL10_KORVE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L10

Gene names

Name:	rplJ
Ordered Locus Names:	Acid345_4678

Organism

Koribacter versatilis (strain Ellin345)

Taxonomic identifier

204669 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Candidatus Koribacter

Protein attributes

Sequence length	182 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L10P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	ribosome biogenesis Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 182	182	50S ribosomal protein L10 HAMAP MF_00362		PRO_1000079530

Sequences

	Sequence		Length	Mass (Da)
	Q1IHH2 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: D522A285D3889FD3	FASTA	182	19,574
	10 20 30 40 50 60 MAVTKAKKIE VTEKLTEDFK KANHAIVGTF NKLTVSKDYE LRKAVRSVGG KYSVVKNTLA 70 80 90 100 110 120 ERAAKGTKIE DAVKGLAGVT SVAFTDGDPV QLAKVLSKYA KDNPEYEFKA GVVDGKVIKL 130 140 150 160 170 180 ADIDALANMP SKEELYSKLL FLISAPAQRL VTVMNATGRD LAVVLNQGVE KQKFSGGEAP AQ

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin345.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000360 Genomic DNA. Translation: ABF43678.1.
RefSeq	YP_593752.1. NC_008009.1.
3D structure databases
ProteinModelPortal	Q1IHH2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1IHH2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4070723.
GenomeReviews	Gene locus Acid345_4678 in contig CP000360_GR.
KEGG	aba:Acid345_4678.
NMPDR	fig|204669.6.peg.4656.
PATRIC	31986773. VBICanKor57425_4998.
Phylogenomic databases
eggNOG	COG0244.
HOGENOM	HBG597359.
OMA	ANDKFEI.
PhylomeDB	Q1IHH2.
ProtClustDB	PRK00099.
Enzyme and pathway databases
BioCyc	ABAC204669:ACID345_4678-MONOMER.
Family and domain databases
HAMAP	MF_00362. Ribosomal_L10. [Tree]
InterPro	IPR022973. Ribosomal_L10. IPR001790. Ribosomal_L10/acidic_P0. [Graphical view]
KO	K02864.
PANTHER	PTHR11560:SF8. PTHR11560:SF8. 1 hit.
Pfam	PF00466. Ribosomal_L10. 1 hit. [Graphical view]
PROSITE	PS01109. RIBOSOMAL_L10. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL10_KORVE

Accession

Primary (citable) accession number: Q1IHH2

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	June 13, 2006
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program