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Q1IHG6

- EFTU_KORVE

UniProt

Q1IHG6 - EFTU_KORVE

Protein

Elongation factor Tu

Gene

tuf1

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Organism
Koribacter versatilis (strain Ellin345)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (13 Jun 2006)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi82 – 865GTPUniRule annotation
    Nucleotide bindingi137 – 1404GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factor

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciKVER204669:GHL8-1235-MONOMER.
    KVER204669:GHL8-4732-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tuf1UniRule annotation
    Ordered Locus Names:Acid345_1224
    AND
    Name:tuf2UniRule annotation
    Ordered Locus Names:Acid345_4684
    OrganismiKoribacter versatilis (strain Ellin345)
    Taxonomic identifieri204669 [NCBI]
    Taxonomic lineageiBacteriaAcidobacteriaCandidatus Koribacter
    ProteomesiUP000002432: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 395395Elongation factor TuPRO_0000337297Add
    BLAST

    Proteomic databases

    PRIDEiQ1IHG6.

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Protein-protein interaction databases

    STRINGi204669.Acid345_4684.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1IHG6.
    SMRiQ1IHG6. Positions 2-394.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini10 – 205196tr-type GAdd
    BLAST

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni19 – 268G1By similarity
    Regioni61 – 655G2By similarity
    Regioni82 – 854G3By similarity
    Regioni137 – 1404G4By similarity
    Regioni175 – 1773G5By similarity

    Sequence similaritiesi

    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0050.
    HOGENOMiHOG000229290.
    KOiK02358.
    OMAiDYAEIDG.
    OrthoDBiEOG6R5C6X.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. G_TR_1. 1 hit.
    PS51722. G_TR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1IHG6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKEKFDRSK PHVNVGTIGH IDHGKTTLTA AITKVLSKHN PKIAFRSFDS    50
    IDNAPEERER GITIATAHVE YETANRHYAH VDCPGHADYI KNMITGAAQM 100
    DGAILVVAAT DGPMPQTKEH VLLARQVGVP YVVVFLNKCD AVEDAELIDL 150
    VEMEVRELLN KYGFPGDDLP VVRGSALGAL NGEAQWEAKI DELMEAVDKN 200
    IPLPARDIDK PFLMPIEDIF SISGRGTVVT GRIERGKVKV GEEVEIVGFR 250
    ETRKTVVTGV EMFKKQLDEG LAGDNAGLLL RGIGKDDVER GMVLAKGGSI 300
    TPHTKFKGEV YVLSKEEGGR HTPFFKGYRP QFYFRTTDVT GVATLPAGTE 350
    MVMPGDNVAL EIELITPVAM EKGLRFAIRE GGRTVGAGTI SEIIA 395
    Length:395
    Mass (Da):43,030
    Last modified:June 13, 2006 - v1
    Checksum:i6A87FB78AC0A789C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000360 Genomic DNA. Translation: ABF40226.1.
    CP000360 Genomic DNA. Translation: ABF43684.1.
    RefSeqiYP_590300.1. NC_008009.1.
    YP_593758.1. NC_008009.1.

    Genome annotation databases

    EnsemblBacteriaiABF40226; ABF40226; Acid345_1224.
    ABF43684; ABF43684; Acid345_4684.
    GeneIDi4070730.
    4072615.
    KEGGiaba:Acid345_1224.
    aba:Acid345_4684.
    PATRICi31979326. VBICanKor57425_1308.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000360 Genomic DNA. Translation: ABF40226.1 .
    CP000360 Genomic DNA. Translation: ABF43684.1 .
    RefSeqi YP_590300.1. NC_008009.1.
    YP_593758.1. NC_008009.1.

    3D structure databases

    ProteinModelPortali Q1IHG6.
    SMRi Q1IHG6. Positions 2-394.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 204669.Acid345_4684.

    Proteomic databases

    PRIDEi Q1IHG6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABF40226 ; ABF40226 ; Acid345_1224 .
    ABF43684 ; ABF43684 ; Acid345_4684 .
    GeneIDi 4070730.
    4072615.
    KEGGi aba:Acid345_1224.
    aba:Acid345_4684.
    PATRICi 31979326. VBICanKor57425_1308.

    Phylogenomic databases

    eggNOGi COG0050.
    HOGENOMi HOG000229290.
    KOi K02358.
    OMAi DYAEIDG.
    OrthoDBi EOG6R5C6X.

    Enzyme and pathway databases

    BioCyci KVER204669:GHL8-1235-MONOMER.
    KVER204669:GHL8-4732-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. G_TR_1. 1 hit.
    PS51722. G_TR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ellin345.

    Entry informationi

    Entry nameiEFTU_KORVE
    AccessioniPrimary (citable) accession number: Q1IHG6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 20, 2008
    Last sequence update: June 13, 2006
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3