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Q1ICZ5 (Q1ICZ5_PSEE4) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Pseudouridine synthase RuleBase RU003886

EC=5.4.99.- RuleBase RU003886
Gene names
Name:rluC EMBL CAK14468.1
Ordered Locus Names:PSEEN1609 EMBL CAK14468.1
OrganismPseudomonas entomophila (strain L48) [Complete proteome] [HAMAP] EMBL CAK14468.1
Taxonomic identifier384676 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length318 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q1ICZ5 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: F90905266935DFFE

FASTA31835,432
        10         20         30         40         50         60 
MTTNTPPTSG VQLIEVAPEL AGQRIDNFLI TALKGVPKTL VYRILRKGEV RVNKGRIKPE 

        70         80         90        100        110        120 
YKLQAGDIVR VPPVRLPERD EPAPVAQGLL QRLEAAIVYE DKALIVMNKP AGIAVHGGSG 

       130        140        150        160        170        180 
LSFGVIEALR QLRPDAKELE LVHRLDRDTS GLLMIAKKRS MLRHLHAALR GDGVDKRYMA 

       190        200        210        220        230        240 
LVRGHWPTSK KQVNAPLQKS NLRSGERMVE VNDEGKEALT MFRVLRRFGE FATIVEARPI 

       250        260        270        280        290        300 
TGRTHQIRVH TLHAGHMIAG DSKYGDEDFS REIRELGGKR LFLHAYQLTV PLPDGGELKL 

       310 
EAPVDEVWAK TVERLSAT 

« Hide

References

[1]"Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila."
Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F.
Nat. Biotechnol. 24:673-679(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: L48.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT573326 Genomic DNA. Translation: CAK14468.1.
RefSeqYP_607274.1. NC_008027.1.

3D structure databases

ProteinModelPortalQ1ICZ5.
SMRQ1ICZ5. Positions 96-316.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING384676.PSEEN1609.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAK14468; CAK14468; PSEEN1609.
GeneID4086215.
KEGGpen:PSEEN1609.
PATRIC19861380. VBIPseEnt83862_1536.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0564.
HOGENOMHOG000275914.
KOK06179.
OMAIVRVPPV.
OrthoDBEOG6P070X.
ProtClustDBCLSK867667.

Enzyme and pathway databases

BioCycPENT384676:GJB8-1514-MONOMER.

Family and domain databases

Gene3D3.10.290.10. 1 hit.
InterProIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTSM00363. S4. 1 hit.
[Graphical view]
SUPFAMSSF55120. SSF55120. 1 hit.
TIGRFAMsTIGR00005. rluA_subfam. 1 hit.
PROSITEPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1ICZ5_PSEE4
AccessionPrimary (citable) accession number: Q1ICZ5
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: November 13, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)