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Q1ICZ5

- Q1ICZ5_PSEE4

UniProt

Q1ICZ5 - Q1ICZ5_PSEE4

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Protein

Pseudouridine synthase

Gene

rluC

Organism
Pseudomonas entomophila (strain L48)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. lyase activity Source: UniProtKB-KW
  2. pseudouridine synthase activity Source: InterPro
  3. RNA binding Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation, LyaseImported

Enzyme and pathway databases

BioCyciPENT384676:GJB8-1514-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Name:rluCImported
Ordered Locus Names:PSEEN1609Imported
OrganismiPseudomonas entomophila (strain L48)Imported
Taxonomic identifieri384676 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000658: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi384676.PSEEN1609.

Structurei

3D structure databases

ProteinModelPortaliQ1ICZ5.
SMRiQ1ICZ5. Positions 96-316.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0564.
HOGENOMiHOG000275914.
KOiK06179.
OMAiKKQVNAP.
OrthoDBiEOG6P070X.

Family and domain databases

Gene3Di3.10.290.10. 1 hit.
InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view]
SMARTiSM00363. S4. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1ICZ5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTNTPPTSG VQLIEVAPEL AGQRIDNFLI TALKGVPKTL VYRILRKGEV
60 70 80 90 100
RVNKGRIKPE YKLQAGDIVR VPPVRLPERD EPAPVAQGLL QRLEAAIVYE
110 120 130 140 150
DKALIVMNKP AGIAVHGGSG LSFGVIEALR QLRPDAKELE LVHRLDRDTS
160 170 180 190 200
GLLMIAKKRS MLRHLHAALR GDGVDKRYMA LVRGHWPTSK KQVNAPLQKS
210 220 230 240 250
NLRSGERMVE VNDEGKEALT MFRVLRRFGE FATIVEARPI TGRTHQIRVH
260 270 280 290 300
TLHAGHMIAG DSKYGDEDFS REIRELGGKR LFLHAYQLTV PLPDGGELKL
310
EAPVDEVWAK TVERLSAT
Length:318
Mass (Da):35,432
Last modified:June 13, 2006 - v1
Checksum:iF90905266935DFFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573326 Genomic DNA. Translation: CAK14468.1.
RefSeqiWP_011532879.1. NC_008027.1.
YP_607274.1. NC_008027.1.

Genome annotation databases

EnsemblBacteriaiCAK14468; CAK14468; PSEEN1609.
GeneIDi4086215.
KEGGipen:PSEEN1609.
PATRICi19861380. VBIPseEnt83862_1536.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573326 Genomic DNA. Translation: CAK14468.1 .
RefSeqi WP_011532879.1. NC_008027.1.
YP_607274.1. NC_008027.1.

3D structure databases

ProteinModelPortali Q1ICZ5.
SMRi Q1ICZ5. Positions 96-316.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 384676.PSEEN1609.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAK14468 ; CAK14468 ; PSEEN1609 .
GeneIDi 4086215.
KEGGi pen:PSEEN1609.
PATRICi 19861380. VBIPseEnt83862_1536.

Phylogenomic databases

eggNOGi COG0564.
HOGENOMi HOG000275914.
KOi K06179.
OMAi KKQVNAP.
OrthoDBi EOG6P070X.

Enzyme and pathway databases

BioCyci PENT384676:GJB8-1514-MONOMER.

Family and domain databases

Gene3Di 3.10.290.10. 1 hit.
InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006225. PsdUridine_synth_RluC/D.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
IPR002942. S4_RNA-bd.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
PF01479. S4. 1 hit.
[Graphical view ]
SMARTi SM00363. S4. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
PROSITEi PS01129. PSI_RLU. 1 hit.
PS50889. S4. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila."
    Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F.
    Nat. Biotechnol. 24:673-679(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: L48Imported.

Entry informationi

Entry nameiQ1ICZ5_PSEE4
AccessioniPrimary (citable) accession number: Q1ICZ5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: October 29, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3