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Q1ICZ5

- Q1ICZ5_PSEE4

UniProt

Q1ICZ5 - Q1ICZ5_PSEE4

Protein

Pseudouridine synthase

Gene

rluC

Organism
Pseudomonas entomophila (strain L48)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (13 Jun 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. lyase activity Source: UniProtKB-KW
    2. pseudouridine synthase activity Source: InterPro
    3. RNA binding Source: InterPro

    GO - Biological processi

    1. pseudouridine synthesis Source: InterPro

    Keywords - Molecular functioni

    IsomeraseUniRule annotation, LyaseImported

    Enzyme and pathway databases

    BioCyciPENT384676:GJB8-1514-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
    Gene namesi
    Name:rluCImported
    Ordered Locus Names:PSEEN1609Imported
    OrganismiPseudomonas entomophila (strain L48)Imported
    Taxonomic identifieri384676 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000000658: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi384676.PSEEN1609.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1ICZ5.
    SMRiQ1ICZ5. Positions 96-316.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the pseudouridine synthase rluA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0564.
    HOGENOMiHOG000275914.
    KOiK06179.
    OMAiKKQVNAP.
    OrthoDBiEOG6P070X.

    Family and domain databases

    Gene3Di3.10.290.10. 1 hit.
    InterProiIPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view]
    PfamiPF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view]
    SMARTiSM00363. S4. 1 hit.
    [Graphical view]
    SUPFAMiSSF55120. SSF55120. 1 hit.
    TIGRFAMsiTIGR00005. rluA_subfam. 1 hit.
    PROSITEiPS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1ICZ5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTTNTPPTSG VQLIEVAPEL AGQRIDNFLI TALKGVPKTL VYRILRKGEV    50
    RVNKGRIKPE YKLQAGDIVR VPPVRLPERD EPAPVAQGLL QRLEAAIVYE 100
    DKALIVMNKP AGIAVHGGSG LSFGVIEALR QLRPDAKELE LVHRLDRDTS 150
    GLLMIAKKRS MLRHLHAALR GDGVDKRYMA LVRGHWPTSK KQVNAPLQKS 200
    NLRSGERMVE VNDEGKEALT MFRVLRRFGE FATIVEARPI TGRTHQIRVH 250
    TLHAGHMIAG DSKYGDEDFS REIRELGGKR LFLHAYQLTV PLPDGGELKL 300
    EAPVDEVWAK TVERLSAT 318
    Length:318
    Mass (Da):35,432
    Last modified:June 13, 2006 - v1
    Checksum:iF90905266935DFFE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573326 Genomic DNA. Translation: CAK14468.1.
    RefSeqiYP_607274.1. NC_008027.1.

    Genome annotation databases

    EnsemblBacteriaiCAK14468; CAK14468; PSEEN1609.
    GeneIDi4086215.
    KEGGipen:PSEEN1609.
    PATRICi19861380. VBIPseEnt83862_1536.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573326 Genomic DNA. Translation: CAK14468.1 .
    RefSeqi YP_607274.1. NC_008027.1.

    3D structure databases

    ProteinModelPortali Q1ICZ5.
    SMRi Q1ICZ5. Positions 96-316.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 384676.PSEEN1609.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAK14468 ; CAK14468 ; PSEEN1609 .
    GeneIDi 4086215.
    KEGGi pen:PSEEN1609.
    PATRICi 19861380. VBIPseEnt83862_1536.

    Phylogenomic databases

    eggNOGi COG0564.
    HOGENOMi HOG000275914.
    KOi K06179.
    OMAi KKQVNAP.
    OrthoDBi EOG6P070X.

    Enzyme and pathway databases

    BioCyci PENT384676:GJB8-1514-MONOMER.

    Family and domain databases

    Gene3Di 3.10.290.10. 1 hit.
    InterProi IPR020103. PsdUridine_synth_cat_dom.
    IPR006225. PsdUridine_synth_RluC/D.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    IPR002942. S4_RNA-bd.
    [Graphical view ]
    Pfami PF00849. PseudoU_synth_2. 1 hit.
    PF01479. S4. 1 hit.
    [Graphical view ]
    SMARTi SM00363. S4. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55120. SSF55120. 1 hit.
    TIGRFAMsi TIGR00005. rluA_subfam. 1 hit.
    PROSITEi PS01129. PSI_RLU. 1 hit.
    PS50889. S4. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila."
      Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F.
      Nat. Biotechnol. 24:673-679(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: L48Imported.

    Entry informationi

    Entry nameiQ1ICZ5_PSEE4
    AccessioniPrimary (citable) accession number: Q1ICZ5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2006
    Last sequence update: June 13, 2006
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3