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Protein
Submitted name:

Aromatic-amino-acid aminotransferase

Gene

tyrB

Organism
Pseudomonas entomophila (strain L48)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseUniRule annotationImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPENT384676:GJB8-1538-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aromatic-amino-acid aminotransferaseImported
Gene namesi
Name:tyrBImported
Ordered Locus Names:PSEEN1635Imported
OrganismiPseudomonas entomophila (strain L48)Imported
Taxonomic identifieri384676 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000000658 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi384676.PSEEN1635.

Structurei

3D structure databases

ProteinModelPortaliQ1ICX2.
SMRiQ1ICX2. Positions 3-398.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini28 – 394367Aminotran_1_2InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili306 – 33328Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185898.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1ICX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLFSAVELA PRDPILGLNE AFNADPRTDK VNLGVGVYCN EEGRIPLLRA
60 70 80 90 100
VIEAETARAA QHASRGYLPI DGIAQYDQAV QKLIFGKASP LLAEGRVVTV
110 120 130 140 150
QAVGGTGALK IGADFLKRLQ PGAVVAISDP SWENHRALFE TAGFPVQTYR
160 170 180 190 200
YYDAASHDVN RAGMLEDLNK LPSGSIIVLH ACCHNPTGVD LSLDDWKNVL
210 220 230 240 250
EVVKAKGHVP FLDMAYQGFG AGIAEDAFAV RLFAESGLEF FVSSSFSKSF
260 270 280 290 300
SLYGERVGAL SIVTGSKDES TRVLSQVKRV IRTTYSNPPT HGASIVAAVL
310 320 330 340 350
NSPELCQMWE TELAEMRERI HGMRKQMVQL LAEYGANRDF SFVGRQCGMF
360 370 380 390
SYSGLTVEQV TRLKSEFGIY ALDTGRIAVA ALNQSNIHVV TKAIVEVL
Length:398
Mass (Da):43,245
Last modified:June 13, 2006 - v1
Checksum:iA268D35C291CEDBB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573326 Genomic DNA. Translation: CAK14491.1.
RefSeqiWP_011532901.1. NC_008027.1.

Genome annotation databases

EnsemblBacteriaiCAK14491; CAK14491; PSEEN1635.
KEGGipen:PSEEN1635.
PATRICi19861434. VBIPseEnt83862_1562.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573326 Genomic DNA. Translation: CAK14491.1.
RefSeqiWP_011532901.1. NC_008027.1.

3D structure databases

ProteinModelPortaliQ1ICX2.
SMRiQ1ICX2. Positions 3-398.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi384676.PSEEN1635.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK14491; CAK14491; PSEEN1635.
KEGGipen:PSEEN1635.
PATRICi19861434. VBIPseEnt83862_1562.

Phylogenomic databases

eggNOGiENOG4105CGF. Bacteria.
COG1448. LUCA.
HOGENOMiHOG000185898.
KOiK00832.
OMAiRVGACTI.
OrthoDBiEOG6C2WBK.

Enzyme and pathway databases

BioCyciPENT384676:GJB8-1538-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR000796. Asp_trans.
IPR004838. NHTrfase_class1_PyrdxlP-BS.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11879. PTHR11879. 1 hit.
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
PRINTSiPR00799. TRANSAMINASE.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00105. AA_TRANSFER_CLASS_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila."
    Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F.
    Nat. Biotechnol. 24:673-679(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: L48Imported.

Entry informationi

Entry nameiQ1ICX2_PSEE4
AccessioniPrimary (citable) accession number: Q1ICX2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: March 16, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.