Q1IBW2 (Q1IBW2_PSEE4) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 43.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Shikimate dehydrogenase 2 HAMAP MF_00222 EC=1.1.1.25 HAMAP MF_00222 | ||||
| Gene names |
| ||||
| Organism | Pseudomonas entomophila (strain L48) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 384676 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas |
Protein attributes
| Sequence length | 282 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Shikimate + NADP+ = 3-dehydroshikimate + NADPH. HAMAP MF_00222 |
| Pathway | Metabolic intermediate biosynthesis; chorismate biosynthesis; chorismate from D-erythrose 4-phosphate and phosphoenolpyruvate: step 4/7. HAMAP MF_00222 |
| Sequence similarities | Belongs to the shikimate dehydrogenase family. HAMAP MF_00222 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Aromatic amino acid biosynthesis HAMAP MF_00222 |
| Ligand | NADP HAMAP MF_00222 |
| Molecular function | Oxidoreductase RuleBase RU004037 HAMAP MF_00222 SAAS SAAS022893 EMBL CAK14853.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | aromatic amino acid family biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Molecular function | nucleotide binding Inferred from electronic annotation. Source: InterPro shikimate 3-dehydrogenase (NADP+) activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Nucleotide binding | 134 – 138 | 5 | NADP By similarity HAMAP MF_00222 | ||||||
Sites | |||||||||
| Active site | 74 | 1 | Proton acceptor By similarity HAMAP MF_00222 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila." Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F. Nat. Biotechnol. 24:673-679(2006) [PubMed: 16699499] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | Genoscope Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CT573326 Genomic DNA. Translation: CAK14853.1. |
| RefSeq | YP_607657.1. NC_008027.1. |
3D structure databases | |
| ProteinModelPortal | Q1IBW2. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q1IBW2. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4088233. |
| GenomeReviews | Gene locus PSEEN2020 in contig CT573326_GR. |
| KEGG | pen:PSEEN2020. |
| NMPDR | fig|384676.6.peg.1740. |
| PATRIC | 19862212. VBIPseEnt83862_1936. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0169. |
| HOGENOM | HBG553408. |
| OMA | HEHEGDA. |
| PhylomeDB | Q1IBW2. |
| ProtClustDB | PRK12549. |
Enzyme and pathway databases | |
| BioCyc | PENT384676:PSEEN2020-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00222. Shikimate_DH_AroE. [Tree] |
| InterPro | IPR016040. NAD(P)-bd_dom. IPR013708. Shikimate_DH-bd_N. IPR022893. Shikimate_quinate_DH. IPR006151. Shikm_DH/Glu-tRNA_Rdtase. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| KO | K00014. |
| Pfam | PF01488. Shikimate_DH. 1 hit. PF08501. Shikimate_dh_N. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q1IBW2_PSEE4 | ||||||||
| Accession | Primary (citable) accession number: Q1IBW2 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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