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Q1I9X2 (Q1I9X2_PSEE4) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL CAK15551.1
Gene names
Ordered Locus Names:PSEEN2767 EMBL CAK15551.1
OrganismPseudomonas entomophila (strain L48) [Complete proteome] [HAMAP] EMBL CAK15551.1
Taxonomic identifier384676 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length820 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CAK15551.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1I9X2 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 6078F892D7613C00

FASTA82091,655
        10         20         30         40         50         60 
MAKPLQEYQR KRDFNATPEP AGKRARPRSA HALQYCIQKH DASHLHYDFR LELDGTLKSW 

        70         80         90        100        110        120 
AIPKGPSLDP KVRRLAVHVE DHPLDYANFE GHIPEGHYGA GDVIVWDRGV WEPEGDPREA 

       130        140        150        160        170        180 
YAKGKLRFRL QGEKLSGVWN LFRTHLAGKK EQWMLVKSHD GQARSETDYS VVEALPDSVL 

       190        200        210        220        230        240 
SERTLPPRRP AKAPAATRKA GRKPLPELLQ PQLATLVDSP PSGDWRYEVK FDGYRVLARI 

       250        260        270        280        290        300 
DGDDVRLFTR NGHDWSAKMP RQVKALRALG LDAAWLDGEM VVVGDNGVAD FQALQNAFDT 

       310        320        330        340        350        360 
EHDERITYYL FDLPWLGDED LRELPLQARR ATLAKLLEDN ASPLLSYSAD FTEPVDSLLE 

       370        380        390        400        410        420 
SACRLELEGL IGKRADSPYI GRRSSDWIKL KCKQRQEFVI VGYTDPKGSR HGFGALLLAL 

       430        440        450        460        470        480 
HDHDSGQLRY AGKVGTGFSA TTLDSILARL KPLQAAKPPL VSPPTGADVR GVHWLKPHLL 

       490        500        510        520        530        540 
AEVAYAQMTR EGIVRHSVFH GLRDDKPATD IDLEQAMPAK RAAQARPEGL PPLRLTHPDR 

       550        560        570        580        590        600 
VIDATTGTTK REVAQYYAQV ADWLLPQLKD RPVALVRAPD GLGGELFFQK NPGQLHIPHV 

       610        620        630        640        650        660 
LNYSKAQAGQ AAMVLNRADS LLGAVQMNML ELHTWNATDK DFDRPDRFVL DLDPDPALPW 

       670        680        690        700        710        720 
KAMLEATQLT LTLLDELGLK VFLKTSGGKG MHLVVPLTRR AGWDEVKDFS HALVEHMAGL 

       730        740        750        760        770        780 
FPDRLSAVSG PKNRVGRIFI DYLRNGRGAT TVAAYSLRAR EGLPVSVPIW REELTQLKGA 

       790        800        810        820 
NQWNIGNLLT RLAEVDDPWA DMAGTRQSIT VRMRKQLGID 

« Hide

References

[1]"Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila."
Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F.
Nat. Biotechnol. 24:673-679(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: L48.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CT573326 Genomic DNA. Translation: CAK15551.1.
RefSeqYP_608347.1. NC_008027.1.

3D structure databases

ProteinModelPortalQ1I9X2.
SMRQ1I9X2. Positions 533-817.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING384676.PSEEN2767.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAK15551; CAK15551; PSEEN2767.
GeneID4086175.
KEGGpen:PSEEN2767.
PATRIC19863646. VBIPseEnt83862_2647.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.
ProtClustDBPRK05972.

Enzyme and pathway databases

BioCycPENT384676:GJB8-2624-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1I9X2_PSEE4
AccessionPrimary (citable) accession number: Q1I9X2
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: April 16, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)