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Q1I9X2

- Q1I9X2_PSEE4

UniProt

Q1I9X2 - Q1I9X2_PSEE4

Protein
Submitted name:

Putative DNA ligase, ATP-dependent

Gene

PSEEN2767

Organism
Pseudomonas entomophila (strain L48)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (13 Jun 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPENT384676:GJB8-2624-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligase, ATP-dependentImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:PSEEN2767Imported
    OrganismiPseudomonas entomophila (strain L48)Imported
    Taxonomic identifieri384676 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000000658: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi384676.PSEEN2767.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1I9X2.
    SMRiQ1I9X2. Positions 533-817.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiSACDMAL.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1I9X2-1 [UniParc]FASTAAdd to Basket

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    MAKPLQEYQR KRDFNATPEP AGKRARPRSA HALQYCIQKH DASHLHYDFR    50
    LELDGTLKSW AIPKGPSLDP KVRRLAVHVE DHPLDYANFE GHIPEGHYGA 100
    GDVIVWDRGV WEPEGDPREA YAKGKLRFRL QGEKLSGVWN LFRTHLAGKK 150
    EQWMLVKSHD GQARSETDYS VVEALPDSVL SERTLPPRRP AKAPAATRKA 200
    GRKPLPELLQ PQLATLVDSP PSGDWRYEVK FDGYRVLARI DGDDVRLFTR 250
    NGHDWSAKMP RQVKALRALG LDAAWLDGEM VVVGDNGVAD FQALQNAFDT 300
    EHDERITYYL FDLPWLGDED LRELPLQARR ATLAKLLEDN ASPLLSYSAD 350
    FTEPVDSLLE SACRLELEGL IGKRADSPYI GRRSSDWIKL KCKQRQEFVI 400
    VGYTDPKGSR HGFGALLLAL HDHDSGQLRY AGKVGTGFSA TTLDSILARL 450
    KPLQAAKPPL VSPPTGADVR GVHWLKPHLL AEVAYAQMTR EGIVRHSVFH 500
    GLRDDKPATD IDLEQAMPAK RAAQARPEGL PPLRLTHPDR VIDATTGTTK 550
    REVAQYYAQV ADWLLPQLKD RPVALVRAPD GLGGELFFQK NPGQLHIPHV 600
    LNYSKAQAGQ AAMVLNRADS LLGAVQMNML ELHTWNATDK DFDRPDRFVL 650
    DLDPDPALPW KAMLEATQLT LTLLDELGLK VFLKTSGGKG MHLVVPLTRR 700
    AGWDEVKDFS HALVEHMAGL FPDRLSAVSG PKNRVGRIFI DYLRNGRGAT 750
    TVAAYSLRAR EGLPVSVPIW REELTQLKGA NQWNIGNLLT RLAEVDDPWA 800
    DMAGTRQSIT VRMRKQLGID 820
    Length:820
    Mass (Da):91,655
    Last modified:June 13, 2006 - v1
    Checksum:i6078F892D7613C00
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573326 Genomic DNA. Translation: CAK15551.1.
    RefSeqiWP_011533944.1. NC_008027.1.
    YP_608347.1. NC_008027.1.

    Genome annotation databases

    EnsemblBacteriaiCAK15551; CAK15551; PSEEN2767.
    GeneIDi4086175.
    KEGGipen:PSEEN2767.
    PATRICi19863646. VBIPseEnt83862_2647.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573326 Genomic DNA. Translation: CAK15551.1 .
    RefSeqi WP_011533944.1. NC_008027.1.
    YP_608347.1. NC_008027.1.

    3D structure databases

    ProteinModelPortali Q1I9X2.
    SMRi Q1I9X2. Positions 533-817.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 384676.PSEEN2767.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAK15551 ; CAK15551 ; PSEEN2767 .
    GeneIDi 4086175.
    KEGGi pen:PSEEN2767.
    PATRICi 19863646. VBIPseEnt83862_2647.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi SACDMAL.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci PENT384676:GJB8-2624-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila."
      Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F.
      Nat. Biotechnol. 24:673-679(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: L48Imported.

    Entry informationi

    Entry nameiQ1I9X2_PSEE4
    AccessioniPrimary (citable) accession number: Q1I9X2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2006
    Last sequence update: June 13, 2006
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3