Q1I821 (Q1I821_PSEE4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alginate lyase EMBL CAK16207.1
EC=4.2.2.3 EMBL CAK16207.1

Gene names

Ordered Locus Names:

PSEEN3462

Organism

Pseudomonas entomophila (strain L48) [Complete proteome] [HAMAP]

Taxonomic identifier

384676 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	369 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAK16207.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alginic acid catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	periplasmic space Inferred from electronic annotation. Source: InterPro
Molecular function	poly(beta-D-mannuronate) lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1I821 [UniParc]. Last modified June 13, 2006. Version 1. Checksum: 92F0FC76CB1A22B9	FASTA	369	40,597
	10 20 30 40 50 60 MGRKAAPGLS TLIMLALLLP QAQAAQPIWP PRATPQSTMI ADYRTLPCPK EPPPPYTGSL 70 80 90 100 110 120 QLQSKYDPRD ASKSTLRASP DTDSERIAGQ IKPFIAGLVQ AGKRFQQAKK PKQANLALAC 130 140 150 160 170 180 QAQWLEHWAK AGALLAPDAS NTGMAARKWA LAAMAGSVLL TQAAADGKVR LSATQQQWFT 190 200 210 220 230 240 LLGEQVIREY DPRRTSTTVY FNNHDYWAAW AVAATGMLVG RDDFIRWADG NLRRGLAQAV 250 260 270 280 290 300 RRGDYAYLPL EVARSKLAAN YSQYALVPLV LLSESARVNG LAWSDDDQQT LDRLARFAAR 310 320 330 340 350 360 SVLEPDTLPE LKGKHQARVA PYKLAWLIPF LARAPGHRLA RQLYDEEDGE VDNYSQIGGP LKPAYSNLP

References

[1]

"Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila." Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F. Nat. Biotechnol. 24:673-679(2006) [PubMed: 16699499] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

[2]

Genoscope Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT573326 Genomic DNA. Translation: CAK16207.1.
RefSeq	YP_608998.1. NC_008027.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q1I821.
Protein family/group databases
CAZy	PL5. Polysaccharide Lyase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4087339.
GenomeReviews	Gene locus PSEEN3462 in contig CT573326_GR.
KEGG	pen:PSEEN3462.
NMPDR	fig|384676.6.peg.2977.
PATRIC	19865036. VBIPseEnt83862_3340.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG42597.
HOGENOM	HBG641492.
OMA	DYWAAWA.
ProtClustDB	PRK00325.
Enzyme and pathway databases
BioCyc	PENT384676:PSEEN3462-MONOMER.
Family and domain databases
InterPro	IPR008397. Alginate_lyase_dom. IPR008929. Chondroitin_lyas. [Graphical view]
Gene3D	G3DSA:1.50.10.110. Alginate_lyase. 1 hit.
KO	K01729.
Pfam	PF05426. Alginate_lyase. 1 hit. [Graphical view]
SUPFAM	SSF48230. Chondroitin_lyas. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1I821_PSEE4

Accession

Primary (citable) accession number: Q1I821

Entry history

Integrated into UniProtKB/TrEMBL:	June 13, 2006
Last sequence update:	June 13, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)