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Q1I2T6

- Q1I2T6_PSEE4

UniProt

Q1I2T6 - Q1I2T6_PSEE4

Protein

Ribonuclease PH

Gene

rph

Organism
Pseudomonas entomophila (strain L48)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (13 Jun 2006)
      Previous versions | rss
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    Functioni

    Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates.UniRule annotationSAAS annotation

    Catalytic activityi

    tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. tRNA binding Source: InterPro
    2. tRNA nucleotidyltransferase activity Source: UniProtKB-EC
    3. tRNA-specific ribonuclease activity Source: InterPro

    GO - Biological processi

    1. tRNA processing Source: UniProtKB-KW

    Keywords - Molecular functioni

    NucleotidyltransferaseUniRule annotationSAAS annotationImported, Transferase

    Keywords - Biological processi

    tRNA processingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciPENT384676:GJB8-5161-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribonuclease PHUniRule annotation (EC:2.7.7.56UniRule annotation)
    Short name:
    RNase PHUniRule annotation
    Alternative name(s):
    tRNA nucleotidyltransferaseUniRule annotation
    Gene namesi
    Name:rphUniRule annotationImported
    Ordered Locus Names:PSEEN5439Imported
    OrganismiPseudomonas entomophila (strain L48)Imported
    Taxonomic identifieri384676 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000000658: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi384676.PSEEN5439.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1I2T6.
    SMRiQ1I2T6. Positions 14-253.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RNase PH family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0689.
    HOGENOMiHOG000229516.
    KOiK00989.
    OMAiPLKQMIA.
    OrthoDBiEOG6CZQQP.

    Family and domain databases

    Gene3Di3.30.230.70. 1 hit.
    HAMAPiMF_00564. RNase_PH.
    InterProiIPR001247. ExoRNase_PH_dom1.
    IPR015847. ExoRNase_PH_dom2.
    IPR027408. PNPase/RNase_PH_dom.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR002381. RNase_PH_bac-type.
    IPR018336. RNase_PH_CS.
    [Graphical view]
    PfamiPF01138. RNase_PH. 1 hit.
    PF03725. RNase_PH_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF54211. SSF54211. 1 hit.
    SSF55666. SSF55666. 1 hit.
    TIGRFAMsiTIGR01966. RNasePH. 1 hit.
    PROSITEiPS01277. RIBONUCLEASE_PH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1I2T6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLGRFKVPVQ VSQMKRPSGR AADQLRSIRI TRNYTKHAEG SVLVEFGDTK    50
    VICTVSVENG VPRFLKGQGQ GWLTAEYGML PRSTGERNQR EASRGKQGGR 100
    TLEIQRLIGR SLRAALDMSK LGDITLYVDC DVIQADGGTR TASITGAMVA 150
    LCDALAVIKK RGGLKGGNPL KHMIAAVSVG MYQGEAVLDL DYLEDSAAET 200
    DLNVVMTSAG GFIEVQGTAE GAPFQPEDFN AMLALAQKGM GEIFELQQAA 250
    LAD 253
    Length:253
    Mass (Da):27,109
    Last modified:June 13, 2006 - v1
    Checksum:iA7797FC0E393D1D6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573326 Genomic DNA. Translation: CAK18050.1.
    RefSeqiYP_610833.2. NC_008027.1.

    Genome annotation databases

    EnsemblBacteriaiCAK18050; CAK18050; PSEEN5439.
    GeneIDi4087439.
    KEGGipen:PSEEN5439.
    PATRICi19868854. VBIPseEnt83862_5220.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT573326 Genomic DNA. Translation: CAK18050.1 .
    RefSeqi YP_610833.2. NC_008027.1.

    3D structure databases

    ProteinModelPortali Q1I2T6.
    SMRi Q1I2T6. Positions 14-253.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 384676.PSEEN5439.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAK18050 ; CAK18050 ; PSEEN5439 .
    GeneIDi 4087439.
    KEGGi pen:PSEEN5439.
    PATRICi 19868854. VBIPseEnt83862_5220.

    Phylogenomic databases

    eggNOGi COG0689.
    HOGENOMi HOG000229516.
    KOi K00989.
    OMAi PLKQMIA.
    OrthoDBi EOG6CZQQP.

    Enzyme and pathway databases

    BioCyci PENT384676:GJB8-5161-MONOMER.

    Family and domain databases

    Gene3Di 3.30.230.70. 1 hit.
    HAMAPi MF_00564. RNase_PH.
    InterProi IPR001247. ExoRNase_PH_dom1.
    IPR015847. ExoRNase_PH_dom2.
    IPR027408. PNPase/RNase_PH_dom.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR002381. RNase_PH_bac-type.
    IPR018336. RNase_PH_CS.
    [Graphical view ]
    Pfami PF01138. RNase_PH. 1 hit.
    PF03725. RNase_PH_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54211. SSF54211. 1 hit.
    SSF55666. SSF55666. 1 hit.
    TIGRFAMsi TIGR01966. RNasePH. 1 hit.
    PROSITEi PS01277. RIBONUCLEASE_PH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila."
      Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F.
      Nat. Biotechnol. 24:673-679(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: L48Imported.

    Entry informationi

    Entry nameiQ1I2T6_PSEE4
    AccessioniPrimary (citable) accession number: Q1I2T6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2006
    Last sequence update: June 13, 2006
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3