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Q1I2T6

- Q1I2T6_PSEE4

UniProt

Q1I2T6 - Q1I2T6_PSEE4

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Protein

Ribonuclease PH

Gene

rph

Organism
Pseudomonas entomophila (strain L48)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates.UniRule annotationSAAS annotation

Catalytic activityi

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.UniRule annotationSAAS annotation

GO - Molecular functioni

  1. tRNA binding Source: InterPro
  2. tRNA nucleotidyltransferase activity Source: UniProtKB-EC
  3. tRNA-specific ribonuclease activity Source: InterPro

GO - Biological processi

  1. tRNA processing Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseUniRule annotationSAAS annotation, Transferase

Keywords - Biological processi

tRNA processingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciPENT384676:GJB8-5161-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease PHUniRule annotation (EC:2.7.7.56UniRule annotation)
Short name:
RNase PHUniRule annotation
Alternative name(s):
tRNA nucleotidyltransferaseUniRule annotation
Gene namesi
Name:rphUniRule annotationImported
Ordered Locus Names:PSEEN5439Imported
OrganismiPseudomonas entomophila (strain L48)Imported
Taxonomic identifieri384676 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000658: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi384676.PSEEN5439.

Structurei

3D structure databases

ProteinModelPortaliQ1I2T6.
SMRiQ1I2T6. Positions 14-253.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RNase PH family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0689.
HOGENOMiHOG000229516.
KOiK00989.
OMAiPLKQMIA.
OrthoDBiEOG6CZQQP.

Family and domain databases

Gene3Di3.30.230.70. 1 hit.
HAMAPiMF_00564. RNase_PH.
InterProiIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view]
PfamiPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
TIGRFAMsiTIGR01966. RNasePH. 1 hit.
PROSITEiPS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1I2T6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLGRFKVPVQ VSQMKRPSGR AADQLRSIRI TRNYTKHAEG SVLVEFGDTK
60 70 80 90 100
VICTVSVENG VPRFLKGQGQ GWLTAEYGML PRSTGERNQR EASRGKQGGR
110 120 130 140 150
TLEIQRLIGR SLRAALDMSK LGDITLYVDC DVIQADGGTR TASITGAMVA
160 170 180 190 200
LCDALAVIKK RGGLKGGNPL KHMIAAVSVG MYQGEAVLDL DYLEDSAAET
210 220 230 240 250
DLNVVMTSAG GFIEVQGTAE GAPFQPEDFN AMLALAQKGM GEIFELQQAA

LAD
Length:253
Mass (Da):27,109
Last modified:June 13, 2006 - v1
Checksum:iA7797FC0E393D1D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573326 Genomic DNA. Translation: CAK18050.1.
RefSeqiYP_610833.2. NC_008027.1.

Genome annotation databases

EnsemblBacteriaiCAK18050; CAK18050; PSEEN5439.
GeneIDi4087439.
KEGGipen:PSEEN5439.
PATRICi19868854. VBIPseEnt83862_5220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT573326 Genomic DNA. Translation: CAK18050.1 .
RefSeqi YP_610833.2. NC_008027.1.

3D structure databases

ProteinModelPortali Q1I2T6.
SMRi Q1I2T6. Positions 14-253.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 384676.PSEEN5439.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAK18050 ; CAK18050 ; PSEEN5439 .
GeneIDi 4087439.
KEGGi pen:PSEEN5439.
PATRICi 19868854. VBIPseEnt83862_5220.

Phylogenomic databases

eggNOGi COG0689.
HOGENOMi HOG000229516.
KOi K00989.
OMAi PLKQMIA.
OrthoDBi EOG6CZQQP.

Enzyme and pathway databases

BioCyci PENT384676:GJB8-5161-MONOMER.

Family and domain databases

Gene3Di 3.30.230.70. 1 hit.
HAMAPi MF_00564. RNase_PH.
InterProi IPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view ]
Pfami PF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view ]
SUPFAMi SSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
TIGRFAMsi TIGR01966. RNasePH. 1 hit.
PROSITEi PS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila."
    Vodovar N., Vallenet D., Cruveiller S., Rouy Z., Barbe V., Acosta C., Cattolico L., Jubin C., Lajus A., Segurens B., Vacherie B., Wincker P., Weissenbach J., Lemaitre B., Medigue C., Boccard F.
    Nat. Biotechnol. 24:673-679(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: L48Imported.

Entry informationi

Entry nameiQ1I2T6_PSEE4
AccessioniPrimary (citable) accession number: Q1I2T6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: October 29, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3