Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glutamate decarboxylase

Gene
N/A
Organism
Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
OrganismiCitrus sinensis (Sweet orange) (Citrus aurantium var. sinensis)Imported
Taxonomic identifieri2711 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsSapindalesRutaceaeCitrus

Structurei

3D structure databases

ProteinModelPortaliQ1I1D8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1I1D8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVLSKTFSES DESIHSTFAS RYVRNSLPRF TMPENSIPKE AAYQIINDEL
60 70 80 90 100
MLDGNPRLNL ASFVTTWMEP ECDKLMMAAI NKNYVDMDEY PVTTELQNRC
110 120 130 140 150
VNIIARLFNA PLEDSETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK
160 170 180 190 200
PFDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPAKAVEMVD
210 220 230 240 250
ENTICVAAIL GSTLNGEFED VKLLNDLLTE KNKETGWDTP IHVDAASGGF
260 270 280 290 300
IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RNKEDLPEEL
310 320 330 340 350
IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMENCHEN
360 370 380 390 400
AMVLKEGLEK TGRFNIVSKD EGVPLVAFSL KDNKRHDEFE VAELLRRFGW
410 420 430 440 450
IVPAYTMPAD AQHITVLRVV IREDFSRTLA ERLVLDITKV LHELDSLPSK
460 470 480 490
VLVPASEQNG RNGKKTEIET QREVTTYWRK FVSERKANNK NKIC
Length:494
Mass (Da):56,196
Last modified:June 13, 2006 - v1
Checksum:i73AA8CDCA37FC5A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ001727 mRNA. Translation: AAZ05070.1.
RefSeqiNP_001275838.1. NM_001288909.1.
UniGeneiCsi.6312.

Genome annotation databases

GeneIDi102612842.
KEGGicit:102612842.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ001727 mRNA. Translation: AAZ05070.1.
RefSeqiNP_001275838.1. NM_001288909.1.
UniGeneiCsi.6312.

3D structure databases

ProteinModelPortaliQ1I1D8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi102612842.
KEGGicit:102612842.

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Cloning and characterization of Citrus sinensis flavedo glutamate decarboxylase induced by low oxygen stress."
    Kanellis A.K., Pasentsis K.
    Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ1I1D8_CITSI
AccessioniPrimary (citable) accession number: Q1I1D8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: February 4, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.