Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q1HRJ3

- Q1HRJ3_AEDAE

UniProt

Q1HRJ3 - Q1HRJ3_AEDAE

Protein

Ribosomal protein

Gene

AAEL013221

Organism
Aedes aegypti (Yellowfever mosquito) (Culex aegypti)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (13 Jun 2006)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribosomal proteinUniRule annotation
    Gene namesi
    ORF Names:AAEL013221Imported
    OrganismiAedes aegypti (Yellowfever mosquito) (Culex aegypti)Imported
    Taxonomic identifieri7159 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraNematoceraCulicoideaCulicidaeCulicinaeAediniAedesStegomyia
    ProteomesiUP000008820: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi7159.AAEL013221-PC.

    Structurei

    3D structure databases

    SMRiQ1HRJ3. Positions 12-216.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L1P family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000207014.
    InParanoidiQ1HRJ3.
    KOiK02865.
    OMAiWQNIKTL.
    PhylomeDBiQ1HRJ3.

    Family and domain databases

    Gene3Di3.30.190.20. 2 hits.
    3.40.50.790. 1 hit.
    InterProiIPR002143. Ribosomal_L1.
    IPR023674. Ribosomal_L1-like.
    IPR028364. Ribosomal_L1/biogenesis.
    IPR016094. Ribosomal_L1_2-a/b-sand.
    IPR016095. Ribosomal_L1_3-a/b-sand.
    IPR023673. Ribosomal_L1_CS.
    [Graphical view]
    PfamiPF00687. Ribosomal_L1. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
    SUPFAMiSSF56808. SSF56808. 1 hit.
    PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1HRJ3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATKVSKDIL YECVNEVLKG SKKKHRRFLE TVELQIGLKN YDPQKDKRFS    50
    GTVKLKYIPR PKMQVCVLGD QQHCDEAKAN DIPYMDAEAL KKLNKNKKLV 100
    KKLAKKYDAF LASESLIKQI PRLLGPGLNK AGKFPGLLAH SESMVQKIDE 150
    VKATIKFQMK KVLCLSVAVG HVKMTPDELA QNVHLSINFL VSLLKKHWQN 200
    VRSLHIKSSM GAAQRLY 217
    Length:217
    Mass (Da):24,610
    Last modified:June 13, 2006 - v1
    Checksum:i62423BD22178929F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DQ440101 mRNA. Translation: ABF18134.1.
    CH477993 Genomic DNA. Translation: EAT34546.1.
    RefSeqiXP_001656504.1. XM_001656454.1.
    UniGeneiAae.2642.

    Genome annotation databases

    EnsemblMetazoaiAAEL013221-RC; AAEL013221-PC; AAEL013221.
    GeneIDi5577478.
    KEGGiaag:AaeL_AAEL013221.
    VectorBaseiAAEL013221. Aedes aegypti.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DQ440101 mRNA. Translation: ABF18134.1 .
    CH477993 Genomic DNA. Translation: EAT34546.1 .
    RefSeqi XP_001656504.1. XM_001656454.1.
    UniGenei Aae.2642.

    3D structure databases

    SMRi Q1HRJ3. Positions 12-216.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 7159.AAEL013221-PC.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai AAEL013221-RC ; AAEL013221-PC ; AAEL013221 .
    GeneIDi 5577478.
    KEGGi aag:AaeL_AAEL013221.
    VectorBasei AAEL013221. Aedes aegypti.

    Phylogenomic databases

    HOGENOMi HOG000207014.
    InParanoidi Q1HRJ3.
    KOi K02865.
    OMAi WQNIKTL.
    PhylomeDBi Q1HRJ3.

    Family and domain databases

    Gene3Di 3.30.190.20. 2 hits.
    3.40.50.790. 1 hit.
    InterProi IPR002143. Ribosomal_L1.
    IPR023674. Ribosomal_L1-like.
    IPR028364. Ribosomal_L1/biogenesis.
    IPR016094. Ribosomal_L1_2-a/b-sand.
    IPR016095. Ribosomal_L1_3-a/b-sand.
    IPR023673. Ribosomal_L1_CS.
    [Graphical view ]
    Pfami PF00687. Ribosomal_L1. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002155. Ribosomal_L1. 1 hit.
    SUPFAMi SSF56808. SSF56808. 1 hit.
    PROSITEi PS01199. RIBOSOMAL_L1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: LiverpoolImported.
    2. Ribeiro J.M.C., Chandra P.K., Calvo E., Pham V.M., Wikel S.K.
      Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    3. "An annotated catalogue of salivary gland transcripts in the adult female mosquito, Aedes aegypti."
      Ribeiro J.M.C., Arca B., Lombardo F., Calvo E., Phan V.M., Chandra P.K., Wikel S.K.
      BMC Genomics 8:6-6(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    4. "Genome sequence of Aedes aegypti, a major arbovirus vector."
      Nene V., Wortman J.R., Lawson D., Haas B., Kodira C., Tu Z.J., Loftus B., Xi Z., Megy K., Grabherr M., Ren Q., Zdobnov E.M., Lobo N.F., Campbell K.S., Brown S.E., Bonaldo M.F., Zhu J., Sinkins S.P.
      , Hogenkamp D.G., Amedeo P., Arensburger P., Atkinson P.W., Bidwell S., Biedler J., Birney E., Bruggner R.V., Costas J., Coy M.R., Crabtree J., Crawford M., Debruyn B., Decaprio D., Eiglmeier K., Eisenstadt E., El-Dorry H., Gelbart W.M., Gomes S.L., Hammond M., Hannick L.I., Hogan J.R., Holmes M.H., Jaffe D., Johnston J.S., Kennedy R.C., Koo H., Kravitz S., Kriventseva E.V., Kulp D., Labutti K., Lee E., Li S., Lovin D.D., Mao C., Mauceli E., Menck C.F., Miller J.R., Montgomery P., Mori A., Nascimento A.L., Naveira H.F., Nusbaum C., O'leary S., Orvis J., Pertea M., Quesneville H., Reidenbach K.R., Rogers Y.H., Roth C.W., Schneider J.R., Schatz M., Shumway M., Stanke M., Stinson E.O., Tubio J.M., Vanzee J.P., Verjovski-Almeida S., Werner D., White O., Wyder S., Zeng Q., Zhao Q., Zhao Y., Hill C.A., Raikhel A.S., Soares M.B., Knudson D.L., Lee N.H., Galagan J., Salzberg S.L., Paulsen I.T., Dimopoulos G., Collins F.H., Birren B., Fraser-Liggett C.M., Severson D.W.
      Science 316:1718-1723(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: LiverpoolImported and LVPib12Imported.
    5. VectorBase
      Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: LiverpoolImported.

    Entry informationi

    Entry nameiQ1HRJ3_AEDAE
    AccessioniPrimary (citable) accession number: Q1HRJ3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 13, 2006
    Last sequence update: June 13, 2006
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3