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Q1HRJ3 (Q1HRJ3_AEDAE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal protein RuleBase RU000659
Gene names
ORF Names:AAEL013221
OrganismAedes aegypti (Yellowfever mosquito) (Culex aegypti) [Reference proteome] EMBL ABF18134.1
Taxonomic identifier7159 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Nematocera › Culicoidea › Culicidae › Culicinae › Aedini › Aedes › Stegomyia

Protein attributes

Sequence length217 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L1P family. RuleBase RU000659

Sequences

Sequence LengthMass (Da)Tools
Q1HRJ3 [UniParc].

Last modified June 13, 2006. Version 1.
Checksum: 62423BD22178929F

FASTA21724,610
        10         20         30         40         50         60 
MATKVSKDIL YECVNEVLKG SKKKHRRFLE TVELQIGLKN YDPQKDKRFS GTVKLKYIPR 

        70         80         90        100        110        120 
PKMQVCVLGD QQHCDEAKAN DIPYMDAEAL KKLNKNKKLV KKLAKKYDAF LASESLIKQI 

       130        140        150        160        170        180 
PRLLGPGLNK AGKFPGLLAH SESMVQKIDE VKATIKFQMK KVLCLSVAVG HVKMTPDELA 

       190        200        210 
QNVHLSINFL VSLLKKHWQN VRSLHIKSSM GAAQRLY

« Hide

References

« Hide 'large scale' references
[1]Loftus B.J., Nene V.M., Hannick L.I., Bidwell S., Haas B., Amedeo P., Orvis J., Wortman J.R., White O.R., Salzberg S., Shumway M., Koo H., Zhao Y., Holmes M., Miller J., Schatz M., Pop M., Pai G. expand/collapse author list , Utterback T., Rogers Y.-H., Kravitz S., Fraser C.M.
Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Liverpool EMBL EAT34546.1.
[2]Ribeiro J.M.C., Chandra P.K., Calvo E., Pham V.M., Wikel S.K.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"An annotated catalogue of salivary gland transcripts in the adult female mosquito, Aedes aegypti."
Ribeiro J.M.C., Arca B., Lombardo F., Calvo E., Phan V.M., Chandra P.K., Wikel S.K.
BMC Genomics 8:6-6(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Genome sequence of Aedes aegypti, a major arbovirus vector."
Nene V., Wortman J.R., Lawson D., Haas B., Kodira C., Tu Z.J., Loftus B., Xi Z., Megy K., Grabherr M., Ren Q., Zdobnov E.M., Lobo N.F., Campbell K.S., Brown S.E., Bonaldo M.F., Zhu J., Sinkins S.P. expand/collapse author list , Hogenkamp D.G., Amedeo P., Arensburger P., Atkinson P.W., Bidwell S., Biedler J., Birney E., Bruggner R.V., Costas J., Coy M.R., Crabtree J., Crawford M., Debruyn B., Decaprio D., Eiglmeier K., Eisenstadt E., El-Dorry H., Gelbart W.M., Gomes S.L., Hammond M., Hannick L.I., Hogan J.R., Holmes M.H., Jaffe D., Johnston J.S., Kennedy R.C., Koo H., Kravitz S., Kriventseva E.V., Kulp D., Labutti K., Lee E., Li S., Lovin D.D., Mao C., Mauceli E., Menck C.F., Miller J.R., Montgomery P., Mori A., Nascimento A.L., Naveira H.F., Nusbaum C., O'leary S., Orvis J., Pertea M., Quesneville H., Reidenbach K.R., Rogers Y.H., Roth C.W., Schneider J.R., Schatz M., Shumway M., Stanke M., Stinson E.O., Tubio J.M., Vanzee J.P., Verjovski-Almeida S., Werner D., White O., Wyder S., Zeng Q., Zhao Q., Zhao Y., Hill C.A., Raikhel A.S., Soares M.B., Knudson D.L., Lee N.H., Galagan J., Salzberg S.L., Paulsen I.T., Dimopoulos G., Collins F.H., Birren B., Fraser-Liggett C.M., Severson D.W.
Science 316:1718-1723(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Liverpool EMBL EAT34546.1 and LVPib12.
[5]VectorBase
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Liverpool EMBL EAT34546.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DQ440101 mRNA. Translation: ABF18134.1.
CH477993 Genomic DNA. Translation: EAT34546.1.
RefSeqXP_001656504.1. XM_001656454.1.
UniGeneAae.2642.

3D structure databases

SMRQ1HRJ3. Positions 12-216.
ModBaseSearch...

Protein-protein interaction databases

STRING7159.AAEL013221-PC.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaAAEL013221-RC; AAEL013221-PC; AAEL013221.
GeneID5577478.
KEGGaag:AaeL_AAEL013221.
VectorBaseAAEL013221. Aedes aegypti.

Phylogenomic databases

HOGENOMHOG000207014.
InParanoidQ1HRJ3.
KOK02865.
OMAGPRNKMP.
PhylomeDBQ1HRJ3.

Family and domain databases

Gene3D3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
InterProIPR002143. Ribosomal_L1.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
IPR023674. Ribosomal_L1_SF.
[Graphical view]
PfamPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMSSF56808. Ribosomal_L1. 1 hit.
PROSITEPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1HRJ3_AEDAE
AccessionPrimary (citable) accession number: Q1HRJ3
Entry history
Integrated into UniProtKB/TrEMBL: June 13, 2006
Last sequence update: June 13, 2006
Last modified: May 1, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info