Q1H0V7 (Q1H0V7_METFK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003886
EC=5.4.99.- RuleBase RU003886

Gene names

Ordered Locus Names:

Mfla_1612

Organism

Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) [Complete proteome] [HAMAP] EMBL ABE49880.1

Taxonomic identifier

265072 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Methylophilales › Methylophilaceae › Methylobacillus › Methylobacillus flagellatum

Protein attributes

Sequence length	356 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
Molecular function	Isomerase RuleBase RU003886 EMBL ABE49880.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1H0V7 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: 871B183058CCE3B8	FASTA	356	40,381
	10 20 30 40 50 60 MSHTATPITL TITQELGGMR LDQALQRLMP EHSRSRIQGW IKDGLVTIDD ETPTAKFKVW 70 80 90 100 110 120 GGEQVQIKPQ ATPEALAFEP ENIPLEVVFE DEHILVINKP AGMVVHPAAG NWSGTLLNAL 130 140 150 160 170 180 LYHAPQLKDV PRAGIVHRLD KDTSGLLVVA KTLAAQTNLV RQLQARTVKR EYRTIVWGQV 190 200 210 220 230 240 WRNGKVDQPI GRHPHARTKM AVNRMGKPAV THYEVLDRFS VHTYMRCLLE TGRTHQIRVH 250 260 270 280 290 300 MQHLKAPIVG DPVYGIRGIL PLRHISDNLR NVLLEFKRQA LHAIRLGLKH PVSGEPMEWQ 310 320 330 340 350 VELAADMKIL LEAIRAENVP PEEADAFYVD DGEFAYEYEY GEDENDDWLE EDDDVE

References

[1]

"Complete sequence of Methylobacillus flagellatus KT." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. , Larimer F., Land M., Kyrpides N., Anderson I., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: KT / ATCC 51484 / DSM 6875.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000284 Genomic DNA. Translation: ABE49880.1.
RefSeq	YP_545721.1. NC_007947.1.
3D structure databases
ProteinModelPortal	Q1H0V7.
SMR	Q1H0V7. Positions 78-317.
ModBase	Search...
Protein-protein interaction databases
STRING	265072.Mfla_1612.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE49880; ABE49880; Mfla_1612.
GeneID	4000354.
KEGG	mfa:Mfla_1612.
PATRIC	32268969. VBIMetFla97085_1710.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0564.
HOGENOM	HOG000275919.
KO	K06180.
OMA	KTIPAQT.
ProtClustDB	CLSK2529491.
Enzyme and pathway databases
BioCyc	MFLA265072:GHWJ-1674-MONOMER.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006225. PsdUridine_synth_RluC/D. IPR006224. PsdUridine_synth_RluC/D_CS. IPR006145. PsdUridine_synth_RsuA/RluD. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00005. rluA_subfam. 1 hit.
PROSITE	PS01129. PSI_RLU. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1H0V7_METFK

Accession

Primary (citable) accession number: Q1H0V7

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)