Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q1GXL4 (Q1GXL4_METFK) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Ribonuclease P protein component HAMAP-Rule MF_00227
Short name=RNase P protein HAMAP-Rule MF_00227
Short name=RNaseP protein HAMAP-Rule MF_00227
EC=3.1.26.5 HAMAP-Rule MF_00227
Alternative name(s):
Protein C5 HAMAP-Rule MF_00227
Gene names
Name:rnpA HAMAP-Rule MF_00227
Ordered Locus Names:Mfla_2760
OrganismMethylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) [Complete proteome] [HAMAP] EMBL ABE51023.1
Taxonomic identifier265072 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Methylophilales › Methylophilaceae › Methylobacillus ›

Protein attributes

Sequence length127 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme By similarity. HAMAP-Rule MF_00227 SAAS SAAS000100

Catalytic activity

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor. HAMAP-Rule MF_00227 SAAS SAAS000100

Subunit structure

Consists of a catalytic RNA component (M1 or rnpB) and a protein subunit By similarity. HAMAP-Rule MF_00227

Sequence similarities

Belongs to the RnpA family. HAMAP-Rule MF_00227

Sequences

Sequence LengthMass (Da)Tools
Q1GXL4 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 50F7EFD8BB74815A

FASTA12715,132
        10         20         30         40         50         60 
MVLPAYAFRR QAKLLKTDEF SSVFNFRKRV SGQYLVLHYR HNELAYARLG LVVGRKTARR 

        70         80         90        100        110        120 
AVDRNYIKRV MRELFRVNQH QLPGLDLVAR PHRMFGRQQF AEIEQEFTEL VAKLQRKLAS 


RQEQPEC

« Hide

References

[1]"Complete sequence of Methylobacillus flagellatus KT."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Saunders E., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Kyrpides N., Anderson I., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KT / ATCC 51484 / DSM 6875.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000284 Genomic DNA. Translation: ABE51023.1.
RefSeqYP_546864.1. NC_007947.1.

3D structure databases

ProteinModelPortalQ1GXL4.
ModBaseSearch...

Protein-protein interaction databases

STRING265072.Mfla_2760.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE51023; ABE51023; Mfla_2760.
GeneID4001858.
KEGGmfa:Mfla_2760.
PATRIC32271379. VBIMetFla97085_2897.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0594.
HOGENOMHOG000266301.
KOK03536.
OMASVFNFRK.
ProtClustDBPRK04390.

Enzyme and pathway databases

BioCycMFLA265072:GHWJ-2821-MONOMER.

Family and domain databases

Gene3D3.30.230.10. 1 hit.
HAMAPMF_00227. RNase_P.
InterProIPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR000100. RNase_P.
IPR020539. RNase_P_CS.
[Graphical view]
PfamPF00825. Ribonuclease_P. 1 hit.
[Graphical view]
ProDomPD003629. Ribonuclease_P. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
TIGRFAMsTIGR00188. rnpA. 1 hit.
PROSITEPS00648. RIBONUCLEASE_P. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GXL4_METFK
AccessionPrimary (citable) accession number: Q1GXL4
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info