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Q1GWL4 (Q1GWL4_SPHAL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sala_0234 EMBL ABF51958.1
OrganismSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP] EMBL ABF51958.1
Taxonomic identifier317655 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingopyxis

Protein attributes

Sequence length405 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GWL4 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: B1C4FF50E5204916

FASTA40542,699
        10         20         30         40         50         60 
MSEVIDQFRA NPGLRTLAVV DAEERPVGVI REQRVRELLF CPFWFSLMQN PTIGGSIASM 

        70         80         90        100        110        120 
IEDCPTADVE RSTTELLRIA ASAPDGRDLI LVQGGRFVET LDGSQLARLA MQREVELAQE 

       130        140        150        160        170        180 
RAARATHIDA AGRAFQRDIA ALTASLSDMA GQVEAVAGEL SHRAHQTGRD AVTVAGATAQ 

       190        200        210        220        230        240 
TLAGLQDLGD RGHALAATMA RIVEDSRLAR TVRGDAHAKI RQASERASAL KAASQSIEQM 

       250        260        270        280        290        300 
LALVIDMASR TNMLALNAGI EAARAGDAGR GFAVVAAEVK ALARQTRAAA GDITRYVDHI 

       310        320        330        340        350        360 
RDIVGEVSAG FVEVERAIDA NNGFSDAIDR AVDGQSATTL TIASYVEQAV FAGREIDMRV 

       370        380        390        400 
QDIGRGASAV GDGAQALGQL SAGLSAAALS LDQRARYFVR AVAAA 

« Hide

References

[1]"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13593 / LMG 18877 / RB2256.
[2]"The genomic basis of trophic strategy in marine bacteria."
Lauro F.M., McDougald D., Thomas T., Williams T.J., Egan S., Rice S., DeMaere M.Z., Ting L., Ertan H., Johnson J., Ferriera S., Lapidus A., Anderson I., Kyrpides N., Munk A.C., Detter C., Han C.S., Brown M.V. expand/collapse author list , Robb F.T., Kjelleberg S., Cavicchioli R.
Proc. Natl. Acad. Sci. U.S.A. 106:15527-15533(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RB2256 EMBL ABF51958.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000356 Genomic DNA. Translation: ABF51958.1.
RefSeqYP_615291.1. NC_008048.1.

3D structure databases

ProteinModelPortalQ1GWL4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING317655.Sala_0234.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF51958; ABF51958; Sala_0234.
GeneID4083014.
KEGGsal:Sala_0234.
PATRIC23689615. VBISphAla23391_0257.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAANAHIRE.
OrthoDBEOG6TR09S.

Enzyme and pathway databases

BioCycSALA317655:GHHY-234-MONOMER.

Family and domain databases

InterProIPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GWL4_SPHAL
AccessionPrimary (citable) accession number: Q1GWL4
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: July 9, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)