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Protein
Submitted name:

DNA ligase (ATP)

Gene

Sala_0290

Organism
Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciSALA317655:GHHY-289-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:Sala_0290Imported
OrganismiSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis)Imported
Taxonomic identifieri317655 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingopyxis
Proteomesi
  • UP000006578 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi317655.Sala_0290

Structurei

3D structure databases

ProteinModelPortaliQ1GWF9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini326 – 456DNA_LIGASE_A3InterPro annotationAdd BLAST131

Phylogenomic databases

eggNOGiENOG4107QIM Bacteria
COG1793 LUCA
HOGENOMiHOG000036007
KOiK10747
OMAiWLFEESY
OrthoDBiPOG091H09SJ

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

Q1GWF9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKALAALIDR LIYTRSRNSK LALIADYLRC TPDPDRGWAI AALTESLDFP
60 70 80 90 100
AVKAGMVRAL LATRVDEQLF RLSRHFVGDT AETAALLWPE PFQPSPSGEG
110 120 130 140 150
LGVGAIGLAQ GVEPPPQTPP LKGRGLTVTQ AVDALAAASR SDAPAILADL
160 170 180 190 200
LDRLDADGRY ALLKLALGGM RVGVSARLAK QAFAQAFDVP VDDVEELWHA
210 220 230 240 250
IPPPYAPLFA WGEGRAERPD LADVAFFRPF MLAHPLEEES VDLADYAAEW
260 270 280 290 300
KWDGIRVQIV RGGGETRIYS RGGEEIGAAF PELIAAFDQD AVIDGELLVR
310 320 330 340 350
GEVQGGEAAS FNALQQRLGR KTVSKKMLAD YPAFVRVYDL LAVDGDDLRP
360 370 380 390 400
LPWTERRRRL EAFVPRLASS HFDLSQLIEA ADFDDLAERR AGARDAAIEG
410 420 430 440 450
VMLKRRDAPY VAGRRAGLWY KWKRDPLTAD CVMMYAQRGN GRRASFYSDY
460 470 480 490 500
TFGCWSDAGE LLPVGKAYSG FTDEELKWLD KFVREHTLNR FGPVREVEKS
510 520 530 540 550
LVLEVAFDSI HSSKRHKSGL AMRFPRISRI RRDKPAEEAD RIATLRAMVT
Length:550
Mass (Da):60,878
Last modified:June 27, 2006 - v1
Checksum:i5B212B56DA7789B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000356 Genomic DNA Translation: ABF52013.1
RefSeqiWP_011540604.1, NC_008048.1

Genome annotation databases

EnsemblBacteriaiABF52013; ABF52013; Sala_0290
KEGGisal:Sala_0290

Similar proteinsi

Entry informationi

Entry nameiQ1GWF9_SPHAL
AccessioniPrimary (citable) accession number: Q1GWF9
Entry historyiIntegrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: March 28, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health