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Q1GW96 (Q1GW96_SPHAL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length699 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1GW96 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 6DF78CADE01636C1

FASTA69975,586
        10         20         30         40         50         60 
MNAPETPVRA AEAVTPDDAD GRPPTVPLAK RVRRLVTQLG PSRMVATILF LVLAVLIARF 

        70         80         90        100        110        120 
SWQMPLINAA ERALYDARAT LMAPKVQQDP RILLVTYNDE TLFNTGIRSP LDRSLLTAAL 

       130        140        150        160        170        180 
ANIDQMGAKA IGIDIAFDSP RPDDAALKAQ LRAMQTPTWL AYAEQASNPN TIFYEQQKFL 

       190        200        210        220        230        240 
ESFIADVATA RTRPTSVLFH TDDDSVIRRW PDRPAGLPPL MANALAPVDP AHAGYRGAIR 

       250        260        270        280        290        300 
FLVPARAGGG QVEPVFANIP IDSFALPMDA AMRAGFSELV KDRYVLIGGD IIDNDQFNTP 

       310        320        330        340        350        360 
LSRFPDAITG QHETMIGLEV HAHMLAQQLD GAWARPLAGP TLWVLALLVV LAGGLTSLID 

       370        380        390        400        410        420 
MRARWVALAF LGQMAFFVAF PFWLQGRGID TTTLPTFGWA VGWLFGYAAV GTAARTIGSR 

       430        440        450        460        470        480 
QRAFAQSALG KYLPADVAEQ IMRDPDQLSL HGERRNIFCV FTDLEGFTKL SHAVTPETVA 

       490        500        510        520        530        540 
RLLNEYLDRL SDIVLAHGGT IDKFVGDAVV AFWGAPISRP DDGEKAATAA LAMYQAGERF 

       550        560        570        580        590        600 
RVDLAAGDIP PIGMTRVGLH VGDAIVGNFG GEGRIQYTAL GDSMNTASRL EAANKSLKTG 

       610        620        630        640        650        660 
VLISAEAAAR SGRDDLVPMG RVTLRGRAQP VDVFTPRPDL APDQRGRIAA LVAAHGAGDN 

       670        680        690 
DACVTLATEL AQELRQDAAI QFLIERLNQT KRGESYVLS 

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References

[1]"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13593 / LMG 18877 / RB2256.
[2]"The genomic basis of trophic strategy in marine bacteria."
Lauro F.M., McDougald D., Thomas T., Williams T.J., Egan S., Rice S., DeMaere M.Z., Ting L., Ertan H., Johnson J., Ferriera S., Lapidus A., Anderson I., Kyrpides N., Munk A.C., Detter C., Han C.S., Brown M.V. expand/collapse author list , Robb F.T., Kjelleberg S., Cavicchioli R.
Proc. Natl. Acad. Sci. U.S.A. 106:15527-15533(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RB2256 EMBL ABF52076.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000356 Genomic DNA. Translation: ABF52076.1.
RefSeqYP_615409.1. NC_008048.1.

3D structure databases

ProteinModelPortalQ1GW96.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING317655.Sala_0353.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF52076; ABF52076; Sala_0353.
GeneID4081225.
KEGGsal:Sala_0353.
PATRIC23689847. VBISphAla23391_0372.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000288140.
KOK01768.
OMAFANIPID.
OrthoDBEOG6JDW7F.

Enzyme and pathway databases

BioCycSALA317655:GHHY-353-MONOMER.

Family and domain databases

Gene3D3.30.70.1230. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR007890. CHASE2.
[Graphical view]
PfamPF05226. CHASE2. 1 hit.
PF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTSM01080. CHASE2. 1 hit.
SM00044. CYCc. 1 hit.
[Graphical view]
SUPFAMSSF55073. SSF55073. 1 hit.
PROSITEPS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GW96_SPHAL
AccessionPrimary (citable) accession number: Q1GW96
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: July 9, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)