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Q1GVZ5 (Q1GVZ5_SPHAL) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length612 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL ABF52177.1
Chain24 – 612589 Potential EMBL ABF52177.1
PRO_5000119745

Sequences

Sequence LengthMass (Da)Tools
Q1GVZ5 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 44814423102B771B

FASTA61267,583
        10         20         30         40         50         60 
MKAMISTLSL ALSLAVASPA FAQAAPAATP AAAPTAAEAE AFIAAAEKDL FDYTVEAAQV 

        70         80         90        100        110        120 
NWVNATYITE DTDAMAARIN AVGTEKAVKY ALEAAKYSDV PGLSAETKRK LNILRTGLVL 

       130        140        150        160        170        180 
PAPTTPGAAT ELNRIATDLQ SQYGKGRGTL NGKEIAGSDI EAEMGNLERT PVELAEMWTS 

       190        200        210        220        230        240 
WHDNVGAPMK QDYARMVAIA NAGAKELGFA DTGAMWRSGY DMPPEEFARL TEKIWQDMKP 

       250        260        270        280        290        300 
LYVALHTYVR WKLNEKYGDA VQPKTGPIRA DLLGNMWAQE WGNIYPLVAP PGTGDLGYDI 

       310        320        330        340        350        360 
GELLAAQGKT PLDMVKIGEN FYSSLGMAPL PDTFWKRSMF TKPADREVVC HASAWNIDNK 

       370        380        390        400        410        420 
DDIRIKMCIK VNADDFVTIH HELGHNYYQR AYNQQPFLYL NGANDGFHEA IGDFVALSIT 

       430        440        450        460        470        480 
PQYLVDIGLL DKAKVPSADK DIGLLLRQAM DKVAFLPFGL LIDRWRWGVF DGTIQPADYN 

       490        500        510        520        530        540 
KAWTEMRTRY QGIVPPAARP ADAFDAGAKY HIPGNTPYTR YFLARILQFQ FYEAACRQAG 

       550        560        570        580        590        600 
WKGPLHRCSF YGNREVGAKL NAMLEMGASK PWPDALEAFT GKREMSGKAM ADYFAPLKKW 

       610 
LDEQNKGKPQ GW 

« Hide

References

[1]"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13593 / LMG 18877 / RB2256.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000356 Genomic DNA. Translation: ABF52177.1.
RefSeqYP_615510.1. NC_008048.1.

3D structure databases

ProteinModelPortalQ1GVZ5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING317655.Sala_0456.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF52177; ABF52177; Sala_0456.
GeneID4080945.
KEGGsal:Sala_0456.
PATRIC23690045. VBISphAla23391_0470.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000292210.
KOK01283.
OMATVIHHEL.
OrthoDBEOG64FK99.
ProtClustDBCLSK903437.

Enzyme and pathway databases

BioCycSALA317655:GHHY-456-MONOMER.

Family and domain databases

InterProIPR001548. Peptidase_M2.
[Graphical view]
PANTHERPTHR10514. PTHR10514. 1 hit.
PfamPF01401. Peptidase_M2. 1 hit.
[Graphical view]
PRINTSPR00791. PEPDIPTASEA.
ProtoNetSearch...

Entry information

Entry nameQ1GVZ5_SPHAL
AccessionPrimary (citable) accession number: Q1GVZ5
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: November 13, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)