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Q1GVP5 (Q1GVP5_SPHAL) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sala_0556 EMBL ABF52277.1
OrganismSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP] EMBL ABF52277.1
Taxonomic identifier317655 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingopyxis

Protein attributes

Sequence length450 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GVP5 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 31648D6210FB9EE5

FASTA45048,126
        10         20         30         40         50         60 
MVKDNPIHKQ QIDPILMSER FPYYDLDGRL AANAAEIHAI IAGREEAVAR AYWDAFNALP 

        70         80         90        100        110        120 
NMDRRVEGEL YDSYVRGSAR HASVKYADAA GQEAATIACQ NTHMARRVKM PLASVMSCIA 

       130        140        150        160        170        180 
ESQRLTIEYV VEACIGDAER LARLTSAINR LALLEFDIMQ RYASKLDRAV ISSERQTLAR 

       190        200        210        220        230        240 
DFDRSIASLV QDTEGVRERL ARQAASADQA AKGMIAKTSE VAAASEQSAM AMREAASTAA 

       250        260        270        280        290        300 
GLIRAIEDAR SEVEASASVA TRASEQAGEA VAMSEALSHH AESIESILGL IREIAGQTNL 

       310        320        330        340        350        360 
LALNATIEAA RAGESGRGFA VVAQEVKSLA NETARATDDI AGKIAAIQQA TRGSVSANQS 

       370        380        390        400        410        420 
IQQTIVDVQR SAQRIREAMD AQAQTVTSIT AAVDETALAA DSMSSTIASI RNDSGMVATE 

       430        440        450 
ISVLSQEFAK MGGRLQQLEQ AASEFSSRVA 

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References

[1]"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13593 / LMG 18877 / RB2256.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000356 Genomic DNA. Translation: ABF52277.1.
RefSeqYP_615610.1. NC_008048.1.

3D structure databases

ProteinModelPortalQ1GVP5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING317655.Sala_0556.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF52277; ABF52277; Sala_0556.
GeneID4081446.
KEGGsal:Sala_0556.
PATRIC23690245. VBISphAla23391_0570.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000123915.
OMAILMSERF.
ProtClustDBCLSK846706.

Enzyme and pathway databases

BioCycSALA317655:GHHY-556-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GVP5_SPHAL
AccessionPrimary (citable) accession number: Q1GVP5
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: May 29, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)