Q1GV38 (Q1GV38_SPHAL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 25 EMBL ABF52484.1

Gene names

Ordered Locus Names:

Sala_0764

Organism

Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP]

Taxonomic identifier

317655 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingopyxis

Protein attributes

Sequence length	251 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABF52484.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1GV38 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: 0FB44E5698FB6676	FASTA	251	27,642
	10 20 30 40 50 60 MKLRAIGGEQ KAGRSNGWRG AAARFLRRIG AAAVLLLLAT GLALWWAARW TPDRAIYPVQ 70 80 90 100 110 120 GVTIDADNGE VHWGSIKAAG ADFAYIAATD GTAGVDARFA RNLSRARDAG VQAGPIHRYS 130 140 150 160 170 180 LCHLATDQAA NFIRHVPRRA DMLPAVVWLD YDDRCPDRPT RALLLSELAT FLAQIETHMG 190 200 210 220 230 240 KQSLIAPGPA FEADYRVTRG IARTTWLRRD FFEPDYGAHP WTMWQANDYV RLSGADGTVG 250 WNVLRAGGEM R

References

[1]

"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13593 / LMG 18877 / RB2256.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000356 Genomic DNA. Translation: ABF52484.1.
RefSeq	YP_615817.1. NC_008048.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4080907.
GenomeReviews	Gene locus Sala_0764 in contig CP000356_GR.
KEGG	sal:Sala_0764.
NMPDR	fig|317655.9.peg.713.
PATRIC	23690683. VBISphAla23391_0787.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG580490.
OMA	FAYLEAS.
ProtClustDB	CLSK753615.
Enzyme and pathway databases
BioCyc	SALA317655:SALA_0764-MONOMER.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K07273.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1GV38_SPHAL

Accession

Primary (citable) accession number: Q1GV38

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)