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Q1GSL8 (Q1GSL8_SPHAL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sala_1641 EMBL ABF53354.1
OrganismSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP] EMBL ABF53354.1
Taxonomic identifier317655 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingopyxis

Protein attributes

Sequence length480 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionphosphorelay sensor kinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GSL8 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: F8E0B58F90B87E43

FASTA48052,153
        10         20         30         40         50         60 
MFGIASRSFC DVGKPMKYDP INPAAPILDE SVASDCGELA VGCSDAAGRI KRATDQMDRQ 

        70         80         90        100        110        120 
IAELGRLEEY VVGLEADQRQ IADSTDEAKL LSARAREQLD AGAERVNLAV SEFRSVIDLI 

       130        140        150        160        170        180 
ARLGTHVTNF AAVMEQVQQV SQSIESIAKT TNMLALNAAI EAERAGDSGR TFAVVAAEVK 

       190        200        210        220        230        240 
KLAQNTRGAT DEIRRSIGSL AAEAGGLVTE IQSGVEQSSR AEAQFETITD ALHDATHLVA 

       250        260        270        280        290        300 
LLDDQSDRIA QSSAMVHANG AKVREALDRV VTSVRDNSST LAGTRDSILT MEHVSNRMFN 

       310        320        330        340        350        360 
AVISAGVSPQ DSAIVALAAK VRDEFVAIAE RALARGELTM EQLFDTDYVR VPNSNPERFR 

       370        380        390        400        410        420 
TSLCDWADAN WRPLFDRIVA EHPEIKMSSA GDMNGFLPTH ITDCSRAPTG DLEHDTAHCR 

       430        440        450        460        470        480 
NGRILYDETD AAAKRSTAPF FMTVYRQEGD GINYLTVRNV YMPAIIGGRR WGDVEVAYQL 

« Hide

References

[1]"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13593 / LMG 18877 / RB2256.
[2]"The genomic basis of trophic strategy in marine bacteria."
Lauro F.M., McDougald D., Thomas T., Williams T.J., Egan S., Rice S., DeMaere M.Z., Ting L., Ertan H., Johnson J., Ferriera S., Lapidus A., Anderson I., Kyrpides N., Munk A.C., Detter C., Han C.S., Brown M.V. expand/collapse author list , Robb F.T., Kjelleberg S., Cavicchioli R.
Proc. Natl. Acad. Sci. U.S.A. 106:15527-15533(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RB2256 EMBL ABF53354.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000356 Genomic DNA. Translation: ABF53354.1.
RefSeqYP_616687.1. NC_008048.1.

3D structure databases

ProteinModelPortalQ1GSL8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING317655.Sala_1641.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF53354; ABF53354; Sala_1641.
GeneID4080719.
KEGGsal:Sala_1641.
PATRIC23692554. VBISphAla23391_1702.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000218006.
KOK03406.
OMAHEENNEF.
OrthoDBEOG6KMB3V.

Enzyme and pathway databases

BioCycSALA317655:GHHY-1664-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003661. EnvZ-like_dim/P.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00388. HisKA. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GSL8_SPHAL
AccessionPrimary (citable) accession number: Q1GSL8
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: July 9, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)