Q1GS79 (Q1GS79_SPHAL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Manganese and iron superoxide dismutase EMBL ABF53493.1

Gene names

Ordered Locus Names:

Sala_1781 EMBL ABF53493.1

Organism

Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP] EMBL ABF53493.1

Taxonomic identifier

317655 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingopyxis › Sphingopyxis alaskensis

Protein attributes

Sequence length	239 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Domain	Signal EMBL ABF53493.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 29	29	Potential EMBL ABF53493.1
	Chain	30 – 239	210	Potential		PRO_5000119987

Sequences

	Sequence		Length	Mass (Da)
	Q1GS79 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: 1F26D2D42C24092A	FASTA	239	25,535
	10 20 30 40 50 60 MSNITRRQAI GTAALSATGI ALAGNAGAAA AQGAGSGAAA FAGKHTPKQL RFNPAKLTGL 70 80 90 100 110 120 SERLITSHWE NNYQGSVRGL NTIETRLAAA MADPDFPAVA YAGLKREELH RTGSIVLHEY 130 140 150 160 170 180 YFDALGGSGN PGGSIYEALD GWFGSFAAWE AEFRRTAMSL AGGSGWCILS YNRHTASLHN 190 200 210 220 230 YWASDHMHGA INAAPLIALD MYEHSYHMDY GAAAAKYVDA FMANLDWEVV DARYRAALS

References

[1]

"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13593 / LMG 18877 / RB2256.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000356 Genomic DNA. Translation: ABF53493.1.
RefSeq	YP_616826.1. NC_008048.1.
3D structure databases
ProteinModelPortal	Q1GS79.
ModBase	Search...
Protein-protein interaction databases
STRING	317655.Sala_1781.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABF53493; ABF53493; Sala_1781.
GeneID	4082093.
KEGG	sal:Sala_1781.
PATRIC	23692850. VBISphAla23391_1848.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000013583.
KO	K04564.
OMA	YHMDYGA.
ProtClustDB	CLSK775350.
Enzyme and pathway databases
BioCyc	SALA317655:GHHY-1829-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. IPR006311. TAT_signal. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS51318. TAT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1GS79_SPHAL

Accession

Primary (citable) accession number: Q1GS79

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)