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Q1GS79 (Q1GS79_SPHAL) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sala_1781 EMBL ABF53493.1
OrganismSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP] EMBL ABF53493.1
Taxonomic identifier317655 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingopyxis

Protein attributes

Sequence length239 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential EMBL ABF53493.1
Chain30 – 239210 Potential EMBL ABF53493.1
PRO_5000119987

Sequences

Sequence LengthMass (Da)Tools
Q1GS79 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 1F26D2D42C24092A

FASTA23925,535
        10         20         30         40         50         60 
MSNITRRQAI GTAALSATGI ALAGNAGAAA AQGAGSGAAA FAGKHTPKQL RFNPAKLTGL 

        70         80         90        100        110        120 
SERLITSHWE NNYQGSVRGL NTIETRLAAA MADPDFPAVA YAGLKREELH RTGSIVLHEY 

       130        140        150        160        170        180 
YFDALGGSGN PGGSIYEALD GWFGSFAAWE AEFRRTAMSL AGGSGWCILS YNRHTASLHN 

       190        200        210        220        230 
YWASDHMHGA INAAPLIALD MYEHSYHMDY GAAAAKYVDA FMANLDWEVV DARYRAALS 

« Hide

References

[1]"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13593 / LMG 18877 / RB2256.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000356 Genomic DNA. Translation: ABF53493.1.
RefSeqYP_616826.1. NC_008048.1.

3D structure databases

ProteinModelPortalQ1GS79.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING317655.Sala_1781.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF53493; ABF53493; Sala_1781.
GeneID4082093.
KEGGsal:Sala_1781.
PATRIC23692850. VBISphAla23391_1848.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000013583.
KOK04564.
OMAYHMDYGA.
OrthoDBEOG6MPWTR.
ProtClustDBCLSK775350.

Enzyme and pathway databases

BioCycSALA317655:GHHY-1806-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GS79_SPHAL
AccessionPrimary (citable) accession number: Q1GS79
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: November 13, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)