Q1GRT7 (Q1GRT7_SPHAL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase EMBL ABF53635.1

Gene names

Ordered Locus Names:

Sala_1923

Organism

Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP]

Taxonomic identifier

317655 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingopyxis

Protein attributes

Sequence length	286 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1GRT7 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: 9DB0D3AF54BE19E1	FASTA	286	31,618
	10 20 30 40 50 60 MQNGLSVDVE DWFQVGAFER TIDRADWPTL ECRVEANCDA VLKIFADAGV KGTFFTLGWV 70 80 90 100 110 120 AERYPALIRR IVAAGHELAS HGYDHKRVFA MTADEFAADL LKTRAILEDI GGVAVRGYRA 130 140 150 160 170 180 PSFSVDARTP WAHPVLAEQG YAYSSSVAPV VHDHYGWPQS PRHAWRPVTG SDLVEWPVTT 190 200 210 220 230 240 ARFAGRTLAA GGGGFMRMLP YGFTRWAIAQ MNAEGHPAIL YFHPWEIDPG QPRVADASIR 250 260 270 280 SKIRHYSGLS AMAGKLKKLL ADFDWTRADA LLPAQQQRAA PWQAAA

References

[1]

"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13593 / LMG 18877 / RB2256.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000356 Genomic DNA. Translation: ABF53635.1.
RefSeq	YP_616968.1. NC_008048.1.
3D structure databases
ProteinModelPortal	Q1GRT7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4082780.
GenomeReviews	Gene locus Sala_1923 in contig CP000356_GR.
KEGG	sal:Sala_1923.
NMPDR	fig|317655.9.peg.1853.
PATRIC	23693146. VBISphAla23391_1993.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG612640.
OMA	VEDYFQV.
ProtClustDB	CLSK843957.
Enzyme and pathway databases
BioCyc	SALA317655:SALA_1923-MONOMER.
Family and domain databases
InterPro	IPR022560. DUF3473. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR014344. PEP-CTERM_polysacc_deacetyl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF11959. DUF3473. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03006. PepC_polyde. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1GRT7_SPHAL

Accession

Primary (citable) accession number: Q1GRT7

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)