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Q1GRK5 (Q1GRK5_SPHAL) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Proline iminopeptidase RuleBase RU003421
EC=3.4.11.5 RuleBase RU003421
Gene names
Ordered Locus Names:Sala_2006
OrganismSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP]
Taxonomic identifier317655 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingopyxis

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Release of N-terminal proline from a peptide. RuleBase RU003421

Sequence similarities

Belongs to the peptidase S33 family. RuleBase RU003421

Ontologies

Keywords
   Molecular functionAminopeptidase RuleBase RU003421 EMBL ABF53717.1
Hydrolase
Protease
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functionaminopeptidase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1351Nucleophile By similarity PIRSR PIRSR006431-1
Active site3101 By similarity PIRSR PIRSR006431-1
Active site3421Proton donor By similarity PIRSR PIRSR006431-1

Sequences

Sequence LengthMass (Da)Tools
Q1GRK5 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 193D9C9508AEFFA5

FASTA36439,508
        10         20         30         40         50         60 
MVMDFSRLQA SSKIGEQWVY PQPACLNFGW LEVDRDPAHR LYWEEYGNPA GEPVMVLHGG 

        70         80         90        100        110        120 
PGGACAPVMA RFFDPKRYRV ILFDQRGCGK SEPNVASAGP AVALAKNTTA DLIGDIEKLR 

       130        140        150        160        170        180 
DHLAIAGPMH VFGGSWGSTL AMAYAIQHPA HCASLILRGI FLGAAEDLLY LYQGNAATWG 

       190        200        210        220        230        240 
DDPFALTAPG AYIKYPDQWA ALLSVLSADE RRDVMASYKA IFDMVPANAA EKERQLNAAL 

       250        260        270        280        290        300 
TWSLWEGVIS NMIPETADTG KFGEADFALC FAQIEAHYFA NDLFLPAGHF FDHIDILASI 

       310        320        330        340        350        360 
PIHIVHGRFD EVCPLTQASR LVAALRAAGA EPVSYVVTNA GHSAMERENA LALTAVMDGL 


GRIV

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References

[1]"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13593 / LMG 18877 / RB2256.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000356 Genomic DNA. Translation: ABF53717.1.
RefSeqYP_617050.1. NC_008048.1.

3D structure databases

ProteinModelPortalQ1GRK5.
ModBaseSearch...

Protein family/group databases

MEROPSS33.001.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4079943.
GenomeReviewsGene locus Sala_2006 in contig CP000356_GR.
KEGGsal:Sala_2006.
NMPDRfig|317655.9.peg.1937.
PATRIC23693326. VBISphAla23391_2083.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG677789.
OMACAPVMAR.
ProtClustDBCLSK890438.

Enzyme and pathway databases

BioCycSALA317655:SALA_2006-MONOMER.

Family and domain databases

InterProIPR000073. AB_hydrolase_1.
IPR005944. Pept_S33.
IPR002410. Peptidase_S33.
[Graphical view]
KOK01259.
PANTHERPTHR10992:SF12. PTHR10992:SF12. 1 hit.
PIRSFPIRSF006431. Pept_S33. 1 hit.
PRINTSPR00111. ABHYDROLASE.
PR00793. PROAMNOPTASE.
TIGRFAMsTIGR01249. Pro_imino_pep_1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1GRK5_SPHAL
AccessionPrimary (citable) accession number: Q1GRK5
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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