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Q1GQK3 (Q1GQK3_SPHAL) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.5.1.3 EMBL ABF54069.1
Gene names
Ordered Locus Names:Sala_2360
OrganismSphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) [Complete proteome] [HAMAP]
Taxonomic identifier317655 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingopyxis

Protein attributes

Sequence length165 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the dihydrofolate reductase family. RuleBase RU004474

Sequences

Sequence LengthMass (Da)Tools
Q1GQK3 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 87663EC747EBA547

FASTA16518,208
        10         20         30         40         50         60 
MNHPEITLIL ARAANGVIGA KGRMPWHLPA DLRRFKQLTM GRPMIMGRKT FDSLPAVLEG 

        70         80         90        100        110        120 
RRHIVLTRDA DWQEEGAEPV ASVEEALKRA NAPHVMVIGG AEIYALFLPL ADRIELTEVG 

       130        140        150        160 
LEPAGDAVID YPDPALWREV ARVDHRAGEA GRPAYSFVTL ARRNG 

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References

[1]"Complete sequence of chromosome of Sphingopyxis alaskensis RB2256."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Chertkov O., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Cavicchioli R., Robb F., Ertan H., Schut F., Ting L.M., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13593 / LMG 18877 / RB2256.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000356 Genomic DNA. Translation: ABF54069.1.
RefSeqYP_617402.1. NC_008048.1.

3D structure databases

ProteinModelPortalQ1GQK3.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4080761.
GenomeReviewsGene locus Sala_2360 in contig CP000356_GR.
KEGGsal:Sala_2360.
NMPDRfig|317655.9.peg.2283.
PATRIC23694070. VBISphAla23391_2449.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG665708.
OMAPTRFVVY.
ProtClustDBCLSK844160.

Enzyme and pathway databases

BioCycSALA317655:SALA_2360-MONOMER.

Family and domain databases

InterProIPR012259. DHFR.
IPR024072. DHFR-like_dom.
IPR017925. DHFR_CS.
IPR001796. DHFR_dom.
[Graphical view]
Gene3DG3DSA:3.40.430.10. G3DSA:3.40.430.10. 1 hit.
KOK00287.
PANTHERPTHR11549:SF1. DHFR. 1 hit.
PfamPF00186. DHFR_1. 1 hit.
[Graphical view]
PIRSFPIRSF000194. DHFR. 1 hit.
PRINTSPR00070. DHFR.
SUPFAMSSF53597. SSF53597. 1 hit.
PROSITEPS00075. DHFR_1. 1 hit.
PS51330. DHFR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GQK3_SPHAL
AccessionPrimary (citable) accession number: Q1GQK3
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)