Q1GMW9 (Q1GMW9_SILST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-glucosidase EMBL ABF61997.1

Gene names

Ordered Locus Names:

TM1040_3867

Encoded on

Plasmid pTM1040

Organism

Silicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]

Taxonomic identifier

292414 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length	784 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid EMBL ABF61997.1
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1GMW9 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: 2DE3EEBEDAE8BEFA	FASTA	784	88,574
	10 20 30 40 50 60 MKCLKIWALE AETTTGVILR VEGRHLLHIS VLEENRFRVS LQKDAEWRLE RTWTVAPAGD 70 80 90 100 110 120 APWEGRRRED ISGFSCPPPQ LSQNETELVL STETMRLRIL APLQMVWEAK VNGAWKAFAE 130 140 150 160 170 180 DRPTGGIHLG LRDHAHAHFL SRHPQEPVFG LGEKTGPLNR VGQRYEMRNL DAMGYDAERT 190 200 210 220 230 240 DPLYKHVPFT LTRTQTAGCW SIFYDNLASC WFDFGNELDN YHAPYRAYRA EDGDLDFYMT 250 260 270 280 290 300 WAPELLDLVK QQERLTGGTA FPPRWSLGYS GSTMSYTDAP DAQAQLEGFL TKIAEYRIPC 310 320 330 340 350 360 DSFQMSSGYT SIGPKRYVFN WNDEKVPDPA AMAAKFADKG VHLIANIKPC LLQDHPRYAE 370 380 390 400 410 420 VANAGLFVQA SAEADTNCGP ERSVFWDDEG SHLDFTNQAT VDWWKQNIGE ALLQRGIGST 430 440 450 460 470 480 WNDNNEYEIW DRHAQCAGFG KAIDMSLMRP VMPILMTRAS MEAQEAHAPE KRPYLISRSG 490 500 510 520 530 540 APGLQRYAQT WSGDNRTDWK TLRWNQRMGL GMSMSGFYNI GHDIGGFSGP RPEPELFVRW 550 560 570 580 590 600 VQNGVFHPRF TIHSWNDDAT VNEPWMYPEV TDHIRAAIEL RYQLLPYLYT CLWQAAERSE 610 620 630 640 650 660 PMLRPLFLDF GADPQAWEES DSFLLGRDLL VATVLDKGVD AISVYLPRHS GGWWDFHTGL 670 680 690 700 710 720 WHEGGQWLTV PVALDTIPLF IRGGAVVPMG QGADRAAPEM EIARLLAVFP AQGVQETTSL 730 740 750 760 770 780 LYEDDGVTKT GKWCLSHLVL NSTNDHISLI SKREGNGAPV LPEALVVLPA GERRILKTGT RIDL

References

[1]

"Complete sequence of plasmid of Silicibacter sp. TM1040." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TM1040.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000375 Genomic DNA. Translation: ABF61997.1.
RefSeq	YP_611259.1. NC_008042.1.
3D structure databases
ProteinModelPortal	Q1GMW9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1GMW9.
Protein family/group databases
CAZy	GH31. Glycoside Hydrolase Family 31.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4074930.
GenomeReviews	Gene locus TM1040_3867 in contig CP000375_GR.
KEGG	sit:TM1040_3867.
NMPDR	fig|292414.1.peg.1260.
PATRIC	23382457. VBIRueSp69653_0099.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1501.
HOGENOM	HBG296575.
OMA	GRRFEFR.
PhylomeDB	Q1GMW9.
Enzyme and pathway databases
BioCyc	SSP292414:TM1040_3867-MONOMER.
Family and domain databases
InterPro	IPR011013. Glyco_hydro-type_carb-bd. IPR000322. Glyco_hydro_31. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
KO	K01187.
PANTHER	PTHR22762. Glyco_hydro_31. 1 hit.
Pfam	PF01055. Glyco_hydro_31. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1GMW9_SILST

Accession

Primary (citable) accession number: Q1GMW9

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)