Q1GMW5 (Q1GMW5_SILST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-glucuronidase EMBL ABF62001.1

Gene names

Ordered Locus Names:

TM1040_3871

Encoded on

Plasmid pTM1040

Organism

Silicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]

Taxonomic identifier

292414 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length	603 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase SAAS SAAS006101 Hydrolase
Technical term	Complete proteome Plasmid EMBL ABF62001.1
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1GMW5 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: 037DA9A858BDD085	FASTA	603	68,733
	10 20 30 40 50 60 MLERSELADN ALQALHDEDY DRPFNTQNLN ADTLIFTRGR QGQSLDGDWN FCVDLLDTGL 70 80 90 100 110 120 RQKWFAMTPE TPADRVEPWD YDPYMGDTVP VPSCWQMQKE KWYFFEGSAW YTRPLTHTPT 130 140 150 160 170 180 PERRQVLRIG AAQYDCKVFL NGAFLGNHYG GSTPFCVELT EALKPGQNWL MLCVNNTRTL 190 200 210 220 230 240 DRVPMRNTDW FNYGGVYREV TLYDLPSVVI RDLFVRLEGN AIRVSAEVDG ECASAQLLIP 250 260 270 280 290 300 ELGIDVELPL IAGKGDLTLP ASPELWSPDN PKLYDVSLTA GEDQVRDRVG FRSISREGTE 310 320 330 340 350 360 ILLNGTPLFL RGISVHEDDA TQGKVTSETD IRRRFAHAKE LGCNFLRLAH YPHHERASEI 370 380 390 400 410 420 ADEMGLMLWE EVPVYWAIDF ANPATRRDAE NQLRELIRRD RNRASVIIWS VGNENPDTDA 430 440 450 460 470 480 RLDFMRGLAD LAKTEDPTRL TSAACLVNHT KLKIEDRLAE YIDIIGLNEY YGWYEENFDE 490 500 510 520 530 540 LNEIGRNSAP DRPVVISETG ADGDSTEQGP ERGLFSLAYQ DEVYAKQIAT LRTLDYVKGM 550 560 570 580 590 600 SPWILYDFRV ERRQGIFQRG WNRKGLIAGD KATKKPAFHR LAAYYAERAA VEHQPPFAPE ETA

References

[1]

"Complete sequence of plasmid of Silicibacter sp. TM1040." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TM1040.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000375 Genomic DNA. Translation: ABF62001.1.
RefSeq	YP_611263.1. NC_008042.1.
3D structure databases
ProteinModelPortal	Q1GMW5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1GMW5.
Protein family/group databases
CAZy	GH2. Glycoside Hydrolase Family 2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4074934.
GenomeReviews	Gene locus TM1040_3871 in contig CP000375_GR.
KEGG	sit:TM1040_3871.
NMPDR	fig|292414.1.peg.1264.
PATRIC	23382465. VBIRueSp69653_0103.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3250.
HOGENOM	HBG428064.
OMA	FREMAER.
PhylomeDB	Q1GMW5.
ProtClustDB	CLSK951995.
Enzyme and pathway databases
BioCyc	SSP292414:TM1040_3871-MONOMER.
Family and domain databases
InterPro	IPR008979. Galactose-bd-like. IPR006101. Glyco_hydro_2. IPR013812. Glyco_hydro_2/20_Ig-like. IPR023232. Glyco_hydro_2_AS. IPR006102. Glyco_hydro_2_Ig-like. IPR006104. Glyco_hydro_2_N. IPR006103. Glyco_hydro_2_TIM. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.320. Glyco_hydro_2/20_Ig-like. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01195.
Pfam	PF00703. Glyco_hydro_2. 1 hit. PF02836. Glyco_hydro_2_C. 1 hit. PF02837. Glyco_hydro_2_N. 1 hit. [Graphical view]
PRINTS	PR00132. GLHYDRLASE2.
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF49303. Glyco_hydro_2Ig. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1GMW5_SILST

Accession

Primary (citable) accession number: Q1GMW5

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)