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Q1GMW3 (Q1GMW3_SILST) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Mannonate dehydratase HAMAP MF_00106
EC=4.2.1.8 HAMAP MF_00106
Alternative name(s):
D-mannonate hydrolase HAMAP MF_00106
Gene names
Name:uxuA HAMAP MF_00106
Ordered Locus Names:TM1040_3873
Encoded onPlasmid pTM1040
OrganismSilicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-mannonate = 2-dehydro-3-deoxy-D-gluconate + H2O. HAMAP MF_00106 SAAS SAAS004628

Pathway

Carbohydrate metabolism; pentose and glucuronate interconversion. HAMAP MF_00106 SAAS SAAS004628

Sequence similarities

Belongs to the mannonate dehydratase family. HAMAP MF_00106

Ontologies

Keywords
   Molecular functionLyase HAMAP MF_00106 SAAS SAAS004628 EMBL ABF62003.1
   Technical termComplete proteome
Plasmid EMBL ABF62003.1
Gene Ontology (GO)
   Biological processglucuronate catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionmannonate dehydratase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GMW3 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 554228AD6C5DE15C

FASTA38943,007
        10         20         30         40         50         60 
MIETWRWFGP NDPVTLTDIR QAGATGVVTA LHSLPNGTVW PVEEIVARRD MITAAGLNWD 

        70         80         90        100        110        120 
VVESVPVHED IKRAAPGWEE KADAWAQSIR NLAACGIKTV CYNFMPLLDW TRTDLTHPLS 

       130        140        150        160        170        180 
DGALCLRYDA VDAAVFDIHI LTRVGADAEH RPEIVQRATE RFTKMTETEC EALTQTILAG 

       190        200        210        220        230        240 
LPGAEESFDI NSFRSHLALY NDIDATRLRA NLAAFLQRVV PVAEEVGVRL GIHPDDPPFP 

       250        260        270        280        290        300 
IFGLPRVVST AEDLDHIIQV YESPSNGLTF CTGSLGVRAD NNLPAMLTRF GKHVNFLHLR 

       310        320        330        340        350        360 
ATQREEDGIS FHEAPHLLGN VDMVAVCKAA LAAEAVGDRE LPFRPDHGHM LAHDQRVSST 

       370        380 
PGYPYIGRLR GLAELRGVLH TLAWLQKDD

« Hide

References

[1]"Complete sequence of plasmid of Silicibacter sp. TM1040."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000375 Genomic DNA. Translation: ABF62003.1.
RefSeqYP_611265.1. NC_008042.1.

3D structure databases

ProteinModelPortalQ1GMW3.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1GMW3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4074936.
GenomeReviewsGene locus TM1040_3873 in contig CP000375_GR.
KEGGsit:TM1040_3873.
NMPDRfig|292414.1.peg.1266.
PATRIC23382469. VBIRueSp69653_0105.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1312.
HOGENOMHBG585927.
OMAVHEEIKT.
PhylomeDBQ1GMW3.
ProtClustDBPRK03906.

Enzyme and pathway databases

BioCycSSP292414:TM1040_3873-MONOMER.

Family and domain databases

HAMAPMF_00106. UxuA.
[Tree]
InterProIPR004628. Man_deHydtase.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
Gene3DG3DSA:3.20.20.150. Xyl_isomerase-like_TIM-brl. 1 hit.
KOK01686.
PfamPF03786. UxuA. 1 hit.
[Graphical view]
PIRSFPIRSF016049. Man_dehyd. 1 hit.
SUPFAMSSF51658. Xyl_isomerase-like_TIM-brl. 1 hit.
TIGRFAMsTIGR00695. UxuA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1GMW3_SILST
AccessionPrimary (citable) accession number: Q1GMW3
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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