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Q1GMG3 (Q1GMG3_RUEST) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:mcpD EMBL ABF62153.1
Ordered Locus Names:TM1040_3179 EMBL ABF62153.1
Encoded onPlasmid mega plasmid EMBL ABF62153.1
OrganismRuegeria sp. (strain TM1040) (Silicibacter sp.) [Complete proteome] [HAMAP] EMBL ABF62153.1
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length885 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL ABF62153.1
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GMG3 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 42BF4ED754EC0B67

FASTA88593,049
        10         20         30         40         50         60 
MLRQIGPKGA KFLRRLNPLS SIRGKITFIL LALLMMVGGA GYLILQSFDR VSRSVGEMTE 

        70         80         90        100        110        120 
RDLPQLAQSN GLILAATKTK DAMIEILMSQ NPEALKNAAT HVETASTELA SAVAALPAEQ 

       130        140        150        160        170        180 
QQAFEADLAK VGATLQASID ARATSFANTD QLNAMTQDLQ RLAADLQAVL LETADDAYFN 

       190        200        210        220        230        240 
TAMKGEDTIT SIEETLFDLA ENKFATLQTV LEIRAEINFL SGITLAMSST TDRSMLSIFG 

       250        260        270        280        290        300 
DLAISSRDRL SGAISSLDGT DAGATAGEDL AMISAALSDA VAAGREGRAV DRDAVLSTRR 

       310        320        330        340        350        360 
EADAVLSSTV DDLVFELTIA ADDAATGNRD AIQGLLDNEV AFLNRLLEIS SWLSAFQIEA 

       370        380        390        400        410        420 
LKIATAQTFE QAEVASKAMQ AASGALAGFS EFGGGILADQ IAQMAAMADP DTGLAAFRIK 

       430        440        450        460        470        480 
SLEANQAATE AASATVNAVL QIAGQASLRG LESQTTITNQ ALGIAADATE VQANLQTIGW 

       490        500        510        520        530        540 
IALAFVGVAL LLSHVLIIRP LNAISLTTER LSQGDMSPVT GFNRASDEIA RIARALTVFR 

       550        560        570        580        590        600 
DGLVEKEELT RIADEERAEN QARQTAAVEA IGMGLARLAR GDLTYRIDQE LTEGYAQLKE 

       610        620        630        640        650        660 
DFNSTAQTLN MTVVDVVQLA DSIRNGSSEI SQASDDLSQR TESQAATLEE TAAALEELTA 

       670        680        690        700        710        720 
SVRSAAEGAR DAENTTNKAR EQATQNGQVV EQAVTAMQEI ESSSSQIEQI IGVIDDIAFQ 

       730        740        750        760        770        780 
TNLLALNAGV EAARAGEAGR GFAVVASEVR GLSQRTTEAA RDIKELISKS STQVEAGVDL 

       790        800        810        820        830        840 
VGRAGQALGD ILERVTHISG LVSTIAESTD EQATGLGEAN VAVSQLDQVT QQNAAMVEET 

       850        860        870        880 
NAAGQLLRQD AEKLATLMAN FTVSSISSSA QAPAEHGSSA PEQAA 

« Hide

References

[1]"Complete sequence of megaplasmid of Silicibacter sp. TM1040."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000376 Genomic DNA. Translation: ABF62153.1.
RefSeqYP_611415.1. NC_008043.1.

3D structure databases

ProteinModelPortalQ1GMG3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292414.TM1040_3179.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF62153; ABF62153; TM1040_3179.
GeneID4075349.
KEGGsit:TM1040_3179.
PATRIC23382776. VBIRueSp69653_0256.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000123752.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycRSP292414:GHCT-3232-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GMG3_RUEST
AccessionPrimary (citable) accession number: Q1GMG3
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: July 9, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)