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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

mcpD

Organism
Ruegeria sp. (strain TM1040) (Silicibacter sp.)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRSP292414:GHCT-3232-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Name:mcpDImported
Ordered Locus Names:TM1040_3179Imported
Encoded oniPlasmid megaplasmid TM1040Imported
OrganismiRuegeria sp. (strain TM1040) (Silicibacter sp.)Imported
Taxonomic identifieri292414 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
ProteomesiUP000000636 Componenti: Plasmid megaplasmid TM1040

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ1GMG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000123752.
OMAiNTRISER.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1GMG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRQIGPKGA KFLRRLNPLS SIRGKITFIL LALLMMVGGA GYLILQSFDR
60 70 80 90 100
VSRSVGEMTE RDLPQLAQSN GLILAATKTK DAMIEILMSQ NPEALKNAAT
110 120 130 140 150
HVETASTELA SAVAALPAEQ QQAFEADLAK VGATLQASID ARATSFANTD
160 170 180 190 200
QLNAMTQDLQ RLAADLQAVL LETADDAYFN TAMKGEDTIT SIEETLFDLA
210 220 230 240 250
ENKFATLQTV LEIRAEINFL SGITLAMSST TDRSMLSIFG DLAISSRDRL
260 270 280 290 300
SGAISSLDGT DAGATAGEDL AMISAALSDA VAAGREGRAV DRDAVLSTRR
310 320 330 340 350
EADAVLSSTV DDLVFELTIA ADDAATGNRD AIQGLLDNEV AFLNRLLEIS
360 370 380 390 400
SWLSAFQIEA LKIATAQTFE QAEVASKAMQ AASGALAGFS EFGGGILADQ
410 420 430 440 450
IAQMAAMADP DTGLAAFRIK SLEANQAATE AASATVNAVL QIAGQASLRG
460 470 480 490 500
LESQTTITNQ ALGIAADATE VQANLQTIGW IALAFVGVAL LLSHVLIIRP
510 520 530 540 550
LNAISLTTER LSQGDMSPVT GFNRASDEIA RIARALTVFR DGLVEKEELT
560 570 580 590 600
RIADEERAEN QARQTAAVEA IGMGLARLAR GDLTYRIDQE LTEGYAQLKE
610 620 630 640 650
DFNSTAQTLN MTVVDVVQLA DSIRNGSSEI SQASDDLSQR TESQAATLEE
660 670 680 690 700
TAAALEELTA SVRSAAEGAR DAENTTNKAR EQATQNGQVV EQAVTAMQEI
710 720 730 740 750
ESSSSQIEQI IGVIDDIAFQ TNLLALNAGV EAARAGEAGR GFAVVASEVR
760 770 780 790 800
GLSQRTTEAA RDIKELISKS STQVEAGVDL VGRAGQALGD ILERVTHISG
810 820 830 840 850
LVSTIAESTD EQATGLGEAN VAVSQLDQVT QQNAAMVEET NAAGQLLRQD
860 870 880
AEKLATLMAN FTVSSISSSA QAPAEHGSSA PEQAA
Length:885
Mass (Da):93,049
Last modified:June 27, 2006 - v1
Checksum:i42BF4ED754EC0B67
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000376 Genomic DNA. Translation: ABF62153.1.
RefSeqiWP_011536799.1. NC_008043.1.
YP_611415.1. NC_008043.1.

Genome annotation databases

EnsemblBacteriaiABF62153; ABF62153; TM1040_3179.
KEGGisit:TM1040_3179.
PATRICi23382776. VBIRueSp69653_0256.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000376 Genomic DNA. Translation: ABF62153.1.
RefSeqiWP_011536799.1. NC_008043.1.
YP_611415.1. NC_008043.1.

3D structure databases

ProteinModelPortaliQ1GMG3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF62153; ABF62153; TM1040_3179.
KEGGisit:TM1040_3179.
PATRICi23382776. VBIRueSp69653_0256.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000123752.
OMAiNTRISER.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciRSP292414:GHCT-3232-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiQ1GMG3_RUEST
AccessioniPrimary (citable) accession number: Q1GMG3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: June 24, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.