Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q1GME8 (Q1GME8_RUEST) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:mcpC EMBL ABF62168.1
Ordered Locus Names:TM1040_3194 EMBL ABF62168.1
Encoded onPlasmid megaplasmid TM1040
OrganismRuegeria sp. (strain TM1040) (Silicibacter sp.) [Complete proteome] [HAMAP] EMBL ABF62168.1
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length614 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL ABF62168.1
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GME8 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: B8589D1F178BBA14

FASTA61464,903
        10         20         30         40         50         60 
MATTEIKSSA LKGWSIFTKL SLLLAAATLV IVTFITVANK LIIDQTVREG VRTLGQNVTY 

        70         80         90        100        110        120 
SVASRSGGAI RFGDQDKLLA DLSLVIEMSE GRSLNGIAVN GDGNLIASAG DAGEAQLDLL 

       130        140        150        160        170        180 
SELALAAFES NEMQVSANGE AFAAPATTSK GVPVGAIAMT WSSKAAMIGA LQQQMIAYGA 

       190        200        210        220        230        240 
GAVLFFAMMF IASMVLRRIV SAPLKDLGTS IVDIAAGQYD KPVEYLERAD EVGRIARNVE 

       250        260        270        280        290        300 
NLKQQLALAH AKETERETAQ AHQKHVVDAL NNALKSMSDG DLTQAIDDPF AEEYETLRRN 

       310        320        330        340        350        360 
FNTTRATMVS IIDSVIESSE RIRSSAEQIS VSSADLSQRT ESQAATLEET AAAMEELNGS 

       370        380        390        400        410        420 
VRSAAGGARE VEGIMEETRA TAEQSSKVVS DAVEAMSNIE ASSVKISKIL TMIDDIAFQT 

       430        440        450        460        470        480 
NLLALNAGVE AARAGEAGRG FAVVASEVRA LAQRSSDAAQ EIKHLIVEST EQVGEGVRLV 

       490        500        510        520        530        540 
GRTGEELDKI IGRVGTISGH VSGIATGAEE QSTTLNEINT GVSQLDQVTQ HNAAMVEETT 

       550        560        570        580        590        600 
AASQVLRNDA TQLARVVAIF KTGDTKRKSQ SEPEAPTVAQ ADVSHAYAAE ESPQEAPAAD 

       610 
AQILQKKAVG WEDF 

« Hide

References

[1]"Complete sequence of megaplasmid of Silicibacter sp. TM1040."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000376 Genomic DNA. Translation: ABF62168.1.
RefSeqYP_611430.1. NC_008043.1.

3D structure databases

ProteinModelPortalQ1GME8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292414.TM1040_3194.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF62168; ABF62168; TM1040_3194.
GeneID4075298.
KEGGsit:TM1040_3194.
PATRIC23382818. VBIRueSp69653_0271.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
OrthoDBEOG67X1NZ.

Enzyme and pathway databases

BioCycRSP292414:GHCT-3253-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GME8_RUEST
AccessionPrimary (citable) accession number: Q1GME8
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: February 19, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)