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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

mcpC

Organism
Ruegeria sp. (strain TM1040) (Silicibacter sp.)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Name:mcpCImported
Ordered Locus Names:TM1040_3194Imported
Encoded oniPlasmid megaplasmid TM1040Imported
OrganismiRuegeria sp. (strain TM1040) (Silicibacter sp.)Imported
Taxonomic identifieri292414 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
Proteomesi
  • UP000000636 Componenti: Plasmid megaplasmid TM1040

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 42HelicalSequence analysisAdd BLAST23
Transmembranei176 – 196HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ1GME8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini198 – 251HAMPInterPro annotationAdd BLAST54
Domaini261 – 313HAMPInterPro annotationAdd BLAST53
Domaini318 – 547Methyl-accepting transducerInterPro annotationAdd BLAST230

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

OMAiQMEYSEN.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1GME8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATTEIKSSA LKGWSIFTKL SLLLAAATLV IVTFITVANK LIIDQTVREG
60 70 80 90 100
VRTLGQNVTY SVASRSGGAI RFGDQDKLLA DLSLVIEMSE GRSLNGIAVN
110 120 130 140 150
GDGNLIASAG DAGEAQLDLL SELALAAFES NEMQVSANGE AFAAPATTSK
160 170 180 190 200
GVPVGAIAMT WSSKAAMIGA LQQQMIAYGA GAVLFFAMMF IASMVLRRIV
210 220 230 240 250
SAPLKDLGTS IVDIAAGQYD KPVEYLERAD EVGRIARNVE NLKQQLALAH
260 270 280 290 300
AKETERETAQ AHQKHVVDAL NNALKSMSDG DLTQAIDDPF AEEYETLRRN
310 320 330 340 350
FNTTRATMVS IIDSVIESSE RIRSSAEQIS VSSADLSQRT ESQAATLEET
360 370 380 390 400
AAAMEELNGS VRSAAGGARE VEGIMEETRA TAEQSSKVVS DAVEAMSNIE
410 420 430 440 450
ASSVKISKIL TMIDDIAFQT NLLALNAGVE AARAGEAGRG FAVVASEVRA
460 470 480 490 500
LAQRSSDAAQ EIKHLIVEST EQVGEGVRLV GRTGEELDKI IGRVGTISGH
510 520 530 540 550
VSGIATGAEE QSTTLNEINT GVSQLDQVTQ HNAAMVEETT AASQVLRNDA
560 570 580 590 600
TQLARVVAIF KTGDTKRKSQ SEPEAPTVAQ ADVSHAYAAE ESPQEAPAAD
610
AQILQKKAVG WEDF
Length:614
Mass (Da):64,903
Last modified:June 27, 2006 - v1
Checksum:iB8589D1F178BBA14
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000376 Genomic DNA. Translation: ABF62168.1.
RefSeqiWP_011536814.1. NC_008043.1.

Genome annotation databases

EnsemblBacteriaiABF62168; ABF62168; TM1040_3194.
KEGGisit:TM1040_3194.
PATRICi23382818. VBIRueSp69653_0271.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000376 Genomic DNA. Translation: ABF62168.1.
RefSeqiWP_011536814.1. NC_008043.1.

3D structure databases

ProteinModelPortaliQ1GME8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF62168; ABF62168; TM1040_3194.
KEGGisit:TM1040_3194.
PATRICi23382818. VBIRueSp69653_0271.

Phylogenomic databases

OMAiQMEYSEN.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ1GME8_RUEST
AccessioniPrimary (citable) accession number: Q1GME8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: November 2, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.