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Q1GMD3 (Q1GMD3_RUEST) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:mcpB EMBL ABF62183.1
Ordered Locus Names:TM1040_3209 EMBL ABF62183.1
Encoded onPlasmid megaplasmid TM1040
OrganismRuegeria sp. (strain TM1040) (Silicibacter sp.) [Complete proteome] [HAMAP] EMBL ABF62183.1
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length782 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL ABF62183.1
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GMD3 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: FAAEF38C7AE7F1DA

FASTA78284,440
        10         20         30         40         50         60 
MIALSQLKIR YKLPAFLVGF ALLASAILVT VSTVNYQRNA WITVENRFES IAADRASVLE 

        70         80         90        100        110        120 
ALFQTMRADV EVLAELPSTA TAAQRISAAW SGVSDSPAET LRQMYISENP HPPHERFMME 

       130        140        150        160        170        180 
RAQKTIPYNI HHANFHPSFR SLLISKGYSD AYLVNIAGDV IYSVAKQDDY GSNLLSGPHQ 

       190        200        210        220        230        240 
TSNLAATFKR IMTAAPEEVL FSDFEHFAPR DDTPMAFVGT QIVASSGQLV GVFILQIPDT 

       250        260        270        280        290        300 
LVSEIISPAE GLGVSTEVFV VGTDGKARSQ SRFDDGHNVL EDLAFSLQER AATEPQIFDS 

       310        320        330        340        350        360 
NATGIRGKPV VAMARQLPIE EKVWILAVEQ DRDEVLAPVR GDRMLLILTS LASALVMTGI 

       370        380        390        400        410        420 
GWWFARSFLK PIDGLCARMS EISEGQLDAP IPEADRADEF GHMGQILRTM QGDLQRAKDA 

       430        440        450        460        470        480 
DAHRQHLQEQ QAEVVRHISE GLVQVANGNL AHRITEPFDA DYEKLRSDFN SALTELSDVV 

       490        500        510        520        530        540 
SQVTETADGI RSGADEISQA SDDLSSRTES QAATLEETVA ALDELTASVK SAAEGARNVE 

       550        560        570        580        590        600 
DIVKQARGEA EKSDEVVRNA VDAMTKIETS SAKISQIISV IDDISFQTNL LALNAGVEAA 

       610        620        630        640        650        660 
RAGEAGRGFA VVASEVRGLA QRSSQAALEI KNLISESTQQ VGEGVELVDA AGDSLRSIAE 

       670        680        690        700        710        720 
RVSHISSLVS EIAQGATDQS AGLSEINDGM TQLDQVTQKN AAMVEESTAA SHLLKSDANK 

       730        740        750        760        770        780 
LAELVSHFET GQASAPKRAQ PADDRRPETP RASAHGEDIA FDPPPPIATS TGSAARDLWQ 


DF 

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References

[1]"Complete sequence of megaplasmid of Silicibacter sp. TM1040."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000376 Genomic DNA. Translation: ABF62183.1.
RefSeqYP_611445.1. NC_008043.1.

3D structure databases

ProteinModelPortalQ1GMD3.
SMRQ1GMD3. Positions 507-732.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292414.TM1040_3209.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF62183; ABF62183; TM1040_3209.
GeneID4075313.
KEGGsit:TM1040_3209.
PATRIC23382846. VBIRueSp69653_0285.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000121981.
KOK03406.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK754891.

Enzyme and pathway databases

BioCycRSP292414:GHCT-3268-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GMD3_RUEST
AccessionPrimary (citable) accession number: Q1GMD3
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: February 19, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)