Q1GLR6 (Q1GLR6_SILST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Tetratricopeptide TPR_2 EMBL ABF62400.1

Gene names

Ordered Locus Names:

TM1040_3428

Encoded on

Plasmid megaplasmid TM1040

Organism

Silicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]

Taxonomic identifier

292414 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length	560 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid EMBL ABF62400.1
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1GLR6 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: 8B2FBA53598290BF	FASTA	560	61,357
	10 20 30 40 50 60 MTIAFSPRDL TPLYASAVAL LNAGNLAAAR EQLLRSLHEE GETALSYHYL AQILERAGGP 70 80 90 100 110 120 GTEVLAAQAN ALKCAPNHPV FLAALGVRLV DAGRDQDALV LLRKALEIDP QNPLALPWVM 130 140 150 160 170 180 RLNRRYLQWT SYEEEAAACE MLLKSAHKVD PLLSLTFVDD PAQQLKIAAR SAPDVAVQPL 190 200 210 220 230 240 EPHAPHEKIR VGYFSADFSE HATMHLIEGL IEAHDKGVFE FHVYDFKPDP TSRQHQIIRD 250 260 270 280 290 300 FADCYHDVSA LSAAETAALA RQEQLDIAVD LKGITTDSRP MIFALRVAPV QVSFLGFPGT 310 320 330 340 350 360 TAIAEMDYMI ADRITIPDGD ERFYSEKILR LPGCYQPNTN SRILPEGAGG RAAFGLPDDR 370 380 390 400 410 420 FVFASFNHPH KVGPSEFATW MEILREVPQA VLLFYSGKAD LGAALAERAQ AHGVEPSRVL 430 440 450 460 470 480 ACGPLPQTAH LERIAQVDLC LDCFAYNAHT TASDAVWAGV PLLTLAGRQF AARVATSILS 490 500 510 520 530 540 TAGVPELSTV STKDYVAKAV HLATHPEDLL ALRQKISAAR HGSPLFDTKR WTRDYEALLQ 550 560 MCYQRHRAGE APDHMSLSDG

References

[1]

"Complete sequence of megaplasmid of Silicibacter sp. TM1040." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TM1040.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000376 Genomic DNA. Translation: ABF62400.1.
RefSeq	YP_611662.1. NC_008043.1.
3D structure databases
ProteinModelPortal	Q1GLR6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1GLR6.
Protein family/group databases
CAZy	GT41. Glycosyltransferase Family 41.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4075602.
GenomeReviews	Gene locus TM1040_3428 in contig CP000376_GR.
KEGG	sit:TM1040_3428.
NMPDR	fig|292414.1.peg.1520.
PATRIC	23383300. VBIRueSp69653_0510.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3914.
HOGENOM	HBG684498.
OMA	VFCCFNQ.
ProtClustDB	CLSK754892.
Enzyme and pathway databases
BioCyc	SSP292414:TM1040_3428-MONOMER.
Family and domain databases
InterPro	IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 1 hit.
PROSITE	PS50005. TPR. 1 hit. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1GLR6_SILST

Accession

Primary (citable) accession number: Q1GLR6

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)