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Q1GJ20 (Q1GJ20_RUEST) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:TM1040_0613 EMBL ABF63346.1
OrganismRuegeria sp. (strain TM1040) (Silicibacter sp.) [Complete proteome] [HAMAP] EMBL ABF63346.1
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length586 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1GJ20 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 50707FE1B053034A

FASTA58663,827
        10         20         30         40         50         60 
MFPQGVTEAT CAPPLQCKKD SSLLAQALWQ GNWIHRSRLV SGLVLFTFAF FHFLNVAAGL 

        70         80         90        100        110        120 
VSPALMEAMQ EVREPFSKSP PGQVLLYGSL LVHAGLALWQ VAMRRTLRMS FVQGLQLLLG 

       130        140        150        160        170        180 
VLIPLQLFQH IAHTNYAARV QGYEDEMSSV VVMLWSGPEA LHQYLLLLAV WIHGCVGLHM 

       190        200        210        220        230        240 
WLRLTRWWGT LTPYMIGLAV LIPALALAGL VTEGRRMWAF FSNPEVAQQI IEDYNWPDAA 

       250        260        270        280        290        300 
GFAHLAMVSD YSISIFFGCL VLALGTYGVR RLIRRRRSVR ITYERGPEVT ADRGLTVLEI 

       310        320        330        340        350        360 
SQMNGIAHPS LCGGKGRCTT CRVAILAGGD DLPPPTAAEA RSLRAINAPE NMRLACQITP 

       370        380        390        400        410        420 
TSALTVKRLY MAKGRHQVHA TQGEEKTIAV LFLDIRGFTA RSEGLLPYDV VFLLNRFFDA 

       430        440        450        460        470        480 
IVPQITRAGG AVDKYMGDGL LALFETSDAT SSAQAALTAA ADIGSALERF NRLLVAEGEQ 

       490        500        510        520        530        540 
PLRIGMGVHT GTVVLGEIGA AGHAPRTLIG ATVNAASRLE AKTKELGVEI LISRAVFDTA 

       550        560        570        580 
TLPQAETRFQ TFELRGVDAP VAALPLEHAS RLSDLLADTP SENALR 

« Hide

References

[1]"Complete sequence of chromosome of Silicibacter sp. TM1040."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000377 Genomic DNA. Translation: ABF63346.1.
RefSeqYP_612608.1. NC_008044.1.

3D structure databases

ProteinModelPortalQ1GJ20.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292414.TM1040_0613.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF63346; ABF63346; TM1040_0613.
GeneID4078126.
KEGGsit:TM1040_0613.
PATRIC23385296. VBIRueSp69653_1480.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0633.
HOGENOMHOG000271405.
KOK01768.
OrthoDBEOG6PZX72.
ProtClustDBCLSK881612.

Enzyme and pathway databases

BioCycRSP292414:GHCT-624-MONOMER.

Family and domain databases

Gene3D3.10.20.30. 1 hit.
3.30.70.1230. 1 hit.
InterProIPR001041. 2Fe-2S_ferredoxin-type.
IPR001054. A/G_cyclase.
IPR012675. Beta-grasp_dom.
[Graphical view]
PfamPF00111. Fer2. 1 hit.
PF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTSM00044. CYCc. 1 hit.
[Graphical view]
SUPFAMSSF54292. SSF54292. 1 hit.
SSF55073. SSF55073. 1 hit.
PROSITEPS51085. 2FE2S_FER_2. 1 hit.
PS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GJ20_RUEST
AccessionPrimary (citable) accession number: Q1GJ20
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: November 13, 2013
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)