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Q1GI80

- SYR_RUEST

UniProt

Q1GI80 - SYR_RUEST

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Ruegeria sp. (strain TM1040) (Silicibacter sp.)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciRSP292414:GHCT-919-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:TM1040_0903
OrganismiRuegeria sp. (strain TM1040) (Silicibacter sp.)
Taxonomic identifieri292414 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
ProteomesiUP000000636: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 580580Arginine--tRNA ligasePRO_1000018123Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi292414.TM1040_0903.

Structurei

3D structure databases

ProteinModelPortaliQ1GI80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi131 – 14111"HIGH" regionAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247214.
KOiK01887.
OrthoDBiEOG6JB13C.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1GI80-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNLFTDIRTL VIDSLAAMTA EGALPEGLDF ANVTVEPPRD AAHGDMATNA
60 70 80 90 100
AMVLAKPAKM KPRDIAEALA AKLAQDKRIT SAEVAGPGFL NLRLDLSVWQ
110 120 130 140 150
DVLGKALNAE EAYGRSDMGQ GKRVNVEYVS ANPTGPLHVG HTRGAVFGDA
160 170 180 190 200
LASLLDFAGY DVTREYYIND GGAQVDVLAR SAYLRYLEAH GQSVEFPDGT
210 220 230 240 250
YPGEYLKDVG AALKDKFGDR FVGQPEETWL EEVRNFATDM MMDLIREDLA
260 270 280 290 300
LLGVEMDVFY SEKSLYGTGR IEAALESLDA KGLIYEGVLE PPKGKKPDDW
310 320 330 340 350
EPRIQTLFKS TEHGDDVDRP VKKSDGAWTY FAPDIAYHYD KVSRGFDMLI
360 370 380 390 400
DIFGADHGGY VKRMKAAVSA LSDGKVPLDV KLCQLVKLFK DGQEFKMSKR
410 420 430 440 450
AGTFVTLRDV VDAVGADVTR FMLLTRKNDQ GFDFDLDKAL EQSKDNPVFY
460 470 480 490 500
VQYANARIHS TLRKAREAGI ACDEATLSGA DLSLLTHDAQ LAVARKVAEW
510 520 530 540 550
PRQVEIAART NEPHRIAFFL YELASDLHGL YHLGKSEESL RFVNESSELA
560 570 580
THANLALARA VSIVISAGLG ILGVKPAQEM
Length:580
Mass (Da):63,653
Last modified:June 27, 2006 - v1
Checksum:i80D4613EEC9CA8A7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000377 Genomic DNA. Translation: ABF63636.1.
RefSeqiWP_011538248.1. NC_008044.1.
YP_612898.1. NC_008044.1.

Genome annotation databases

EnsemblBacteriaiABF63636; ABF63636; TM1040_0903.
GeneIDi4076273.
KEGGisit:TM1040_0903.
PATRICi23385920. VBIRueSp69653_1787.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000377 Genomic DNA. Translation: ABF63636.1 .
RefSeqi WP_011538248.1. NC_008044.1.
YP_612898.1. NC_008044.1.

3D structure databases

ProteinModelPortali Q1GI80.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 292414.TM1040_0903.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABF63636 ; ABF63636 ; TM1040_0903 .
GeneIDi 4076273.
KEGGi sit:TM1040_0903.
PATRICi 23385920. VBIRueSp69653_1787.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247214.
KOi K01887.
OrthoDBi EOG6JB13C.

Enzyme and pathway databases

BioCyci RSP292414:GHCT-919-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TM1040.

Entry informationi

Entry nameiSYR_RUEST
AccessioniPrimary (citable) accession number: Q1GI80
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: June 27, 2006
Last modified: October 29, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3