Q1GI45 (Q1GI45_SILST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Agmatinase EMBL ABF63671.1
EC=3.5.3.11 EMBL ABF63671.1

Gene names

Ordered Locus Names:

TM1040_0938

Organism

Silicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]

Taxonomic identifier

292414 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length	342 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Manganese By similarity. RuleBase RU003684
Sequence similarities	Belongs to the arginase family. RuleBase RU003684

Ontologies

Keywords
Ligand	Manganese RuleBase RU003684 Metal-binding RuleBase RU003684 SAAS SAAS005925
Molecular function	Hydrolase SAAS SAAS005925 RuleBase RU003684 EMBL ABF63671.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	agmatinase activity Inferred from electronic annotation. Source: EC metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1GI45 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: A8961814341B9D26	FASTA	342	36,708
	10 20 30 40 50 60 MTSPPALART SAEPENREQS KMALEDAKTQ VDQAFTREDL KGLSFENTFG GATSFLRRRY 70 80 90 100 110 120 TKDLTHADIA VTGIPFDQAV TNRPGTRLGP RAVREASALQ SPDAPYGWDI CPASELAIVD 130 140 150 160 170 180 YGDLAFDYAN VPAFPDTLTD HIRGILATDT ASVAIGGDHY VSFPILKAYA EKYGPVSLLH 190 200 210 220 230 240 FDAHSDTWAD DDFSRVDHGT MFYKAVKSGI IDPATSVQVG IRTTNEDNLG VPTIDAPTVH 250 260 270 280 290 300 EIGPVETARR IREVLGDRPV YLTFDIDCLD PAYAPGTGTP VWGGLTSAQA EAILKGLRGI 310 320 330 340 NILGGDVVEV SPPFDTTGAT AIAGAHVAMS IICLLGWRMT GR

References

[1]

"Complete sequence of chromosome of Silicibacter sp. TM1040." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TM1040.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000377 Genomic DNA. Translation: ABF63671.1.
RefSeq	YP_612933.1. NC_008044.1.
3D structure databases
ProteinModelPortal	Q1GI45.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1GI45.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4077566.
GenomeReviews	Gene locus TM1040_0938 in contig CP000377_GR.
KEGG	sit:TM1040_0938.
NMPDR	fig|292414.1.peg.3018.
PATRIC	23385996. VBIRueSp69653_1824.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0010.
HOGENOM	HBG391953.
OMA	TSFMRRR.
PhylomeDB	Q1GI45.
ProtClustDB	PRK02190.
Enzyme and pathway databases
BioCyc	SSP292414:TM1040_0938-MONOMER.
Family and domain databases
InterPro	IPR005925. Agmatinase-rel. IPR006035. Ureohydrolase. IPR023696. Ureohydrolase_domain. IPR020855. Ureohydrolase_Mn_BS. [Graphical view]
Gene3D	G3DSA:3.40.800.10. Ureohydrolase. 1 hit.
KO	K01480.
PANTHER	PTHR11358. Ureohydrolase. 1 hit.
Pfam	PF00491. Arginase. 1 hit. [Graphical view]
PIRSF	PIRSF036979. Arginase. 1 hit.
TIGRFAMs	TIGR01230. Agmatinase. 1 hit.
PROSITE	PS01053. ARGINASE_1. 1 hit. PS51409. ARGINASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1GI45_SILST

Accession

Primary (citable) accession number: Q1GI45

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)