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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

mcpM

Organism
Ruegeria sp. (strain TM1040) (Silicibacter sp.)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRSP292414:GHCT-1002-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Name:mcpMImported
Ordered Locus Names:TM1040_0984Imported
OrganismiRuegeria sp. (strain TM1040) (Silicibacter sp.)Imported
Taxonomic identifieri292414 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
Proteomesi
  • UP000000636 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei16 – 3520HelicalSequence analysisAdd
BLAST
Transmembranei167 – 19125HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi292414.TM1040_0984.

Structurei

3D structure databases

ProteinModelPortaliQ1GHZ9.
SMRiQ1GHZ9. Positions 330-554.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini189 – 24254HAMPInterPro annotationAdd
BLAST
Domaini252 – 30453HAMPInterPro annotationAdd
BLAST
Domaini309 – 538230Methyl-accepting transducerInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
OMAiHNIVERV.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1GHZ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFLASWFRNM PVKRKILLPG MAGLLMMICV ITTYWTQRLS TALYSGFEEQ
60 70 80 90 100
VALTESYIAA PLATAAWNYD GDLANTTLAS LAERESFVFA RVVSSGDVLA
110 120 130 140 150
EAFKGEAMEE AWIAQSTSLL ESDQVRLEDG DFTYFKTPLM FEGEEAGNMV
160 170 180 190 200
WALDTSIIAN QIMNANIIAA SLGFAIFAGF SVVFYLIAVA VSRPIENVVT
210 220 230 240 250
HIDALQHGDT TREIPEANRR DEIGALGKAL VDFRDTSAEQ KRMEEEKRKQ
260 270 280 290 300
DAVQEHVVTV LSEALGKLST GDLTVSIKDD FPADYEKLSK DFNALVNRLF
310 320 330 340 350
DTVSAVVDAA DSIQNGSTEI SSASDDLARR TESQAATLEE TAAALDELTA
360 370 380 390 400
SVRQAAEGAG SVSNTMEEAK AEAVNSGTIV NNAVSAMTEI EQSSNHISQI
410 420 430 440 450
IGVIDDIAFQ TNLLALNAGV EAARAGEAGR GFAVVASEVR ALAQRSSDAA
460 470 480 490 500
MEIKTLIGDS SKQVERGVDL VGKAGDALHN IVERVTQISG LISDIAQGAS
510 520 530 540 550
EQSAGLGDIN SGMVELDQVT QQNAAMVEEA TAASHMLKAN AVNLAQMVAH
560 570 580 590 600
FQLGAGGRAA SAAPAPAAKD AETIAPSAHG EDWDYTPEPS QVAVASSGNA

AAKIWEDF
Length:608
Mass (Da):64,575
Last modified:June 27, 2006 - v1
Checksum:i156FC6FB92F4A51B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000377 Genomic DNA. Translation: ABF63717.1.
RefSeqiWP_011538327.1. NC_008044.1.

Genome annotation databases

EnsemblBacteriaiABF63717; ABF63717; TM1040_0984.
KEGGisit:TM1040_0984.
PATRICi23386090. VBIRueSp69653_1870.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000377 Genomic DNA. Translation: ABF63717.1.
RefSeqiWP_011538327.1. NC_008044.1.

3D structure databases

ProteinModelPortaliQ1GHZ9.
SMRiQ1GHZ9. Positions 330-554.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292414.TM1040_0984.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF63717; ABF63717; TM1040_0984.
KEGGisit:TM1040_0984.
PATRICi23386090. VBIRueSp69653_1870.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
OMAiHNIVERV.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciRSP292414:GHCT-1002-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ1GHZ9_RUEST
AccessioniPrimary (citable) accession number: Q1GHZ9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: September 7, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.