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Q1GHX7 (Q1GHX7_SILST) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Aconitase EMBL ABF63739.1
EC=4.2.1.3 EMBL ABF63739.1
Gene names
Ordered Locus Names:TM1040_1006
OrganismSilicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length915 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1GHX7 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 1119A14AD71CF239

FASTA91598,874
        10         20         30         40         50         60 
MPITVGQDTA KTRKTLSVNG KSISYYSIPA ATDAGYGDFT KLPAALKVVL ENLLRFEDGG 

        70         80         90        100        110        120 
FSVSTDDIKA FGDWAKNGGK NPREIAYRPA RVLMQDFTGV PAVVDLAAMR DGIKTLGGDA 

       130        140        150        160        170        180 
NKINPLVPVD LVIDHSVMID EFGNPRAFQM NVDREYERNM ERYQFLKWGQ GAFNNFRVVP 

       190        200        210        220        230        240 
PGTGICHQVN LEYLAQTVWS DVDQNGEEVA YPDTLVGTDS HTTMVNGAAV LGWGVGGIEA 

       250        260        270        280        290        300 
EAAMLGQPIS MLIPEVVGFE LTGEMVEGTT GTDLVLKVVE MLRELGVVGK FVEFYGSGLD 

       310        320        330        340        350        360 
NLPLADRATI ANMAPEYGAT CGFFPIDKET IRYLRNTGRD EDRIALVETY AKENGFWRDE 

       370        380        390        400        410        420 
TYAPIYTETL SLDMGTIVPA ISGPKRPQDY VALDGAAQAF KQVVSEYRGV DASANAAEMA 

       430        440        450        460        470        480 
SEGPAPTAPV DPCKSHPVKG EDFALRDGSV VIASITSCTN TSNPYVMIGA GLVAKKAHEL 

       490        500        510        520        530        540 
GLNRKPWVKT SLAPGSQVVS AYLEAAGLQE HLDAIGFNLV GYGCTTCIGN SGPIQKEFSE 

       550        560        570        580        590        600 
AIAEGDLVAT SVLSGNRNFE GRISPDVRAN YLASPPLVVA YALAGDMNVD LARDPLGQDK 

       610        620        630        640        650        660 
DGNDVYLKDI WPTQKEIADL VEATVTREAF QSKYADVFKG DEKWQSVETT EAETYDWPAA 

       670        680        690        700        710        720 
STYIQNPPYF QGMGPEPGKI QDVIGAKPLL ILGDMVTTDH ISPAGSFATT TPAGKYLLDR 

       730        740        750        760        770        780 
QVQPREFNSY GSRRGNHEIM MRGTFANIRI KNEMLDGVEG GYTKGPDGAQ TSVYEASMAH 

       790        800        810        820        830        840 
HEAGTPLVVF GGEQYGAGSS RDWAAKGTAL LGVKAVIAES FERIHRSNLV GMGVIPFEFT 

       850        860        870        880        890        900 
GGDTRKSLKL TGDETVDIRG LETVTPLQEV ECDITYGDGS KKTITLKCRI DTAPEIEYIE 

       910 
NGGVLHYVLR NLAKS

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References

[1]"Complete sequence of chromosome of Silicibacter sp. TM1040."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000377 Genomic DNA. Translation: ABF63739.1.
RefSeqYP_613001.1. NC_008044.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ1GHX7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4078226.
GenomeReviewsGene locus TM1040_1006 in contig CP000377_GR.
KEGGsit:TM1040_1006.
NMPDRfig|292414.1.peg.3079.
PATRIC23386132. VBIRueSp69653_1891.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG289738.
OMAYSKAQGM.
PhylomeDBQ1GHX7.
ProtClustDBPRK09277.

Enzyme and pathway databases

BioCycSSP292414:TM1040_1006-MONOMER.

Family and domain databases

InterProIPR015931. Acnase/IPM_dHydase_lsu_aba_1/3.
IPR015937. Acoase/IPM_deHydtase.
IPR001030. Acoase/IPM_deHydtase_lsu_aba.
IPR015928. Aconitase/3IPM_dehydase_swvl.
IPR006249. Aconitase/Fe_reg_prot_2.
IPR015934. Aconitase/Fe_reg_prot_2/AcnD.
IPR015932. Aconitase/IPMdHydase_lsu_aba_2.
IPR018136. Aconitase_4Fe-4S_BS.
IPR000573. AconitaseA/IPMdHydase_ssu_swvl.
[Graphical view]
Gene3DG3DSA:3.30.499.10. Acnase/IPM_dHydase_lsu_aba_1/3. 3 hits.
G3DSA:3.20.19.10. Aconitase/3IPM_dehydase_swvl. 1 hit.
G3DSA:3.40.1060.10. Aconitase/IPMdHydase_lsu_aba_2. 1 hit.
KOK01681.
PANTHERPTHR11670. Aconitase-like_core. 1 hit.
PTHR11670:SF1. Aconitase/Fe_reg_prot_2/AcnD. 1 hit.
PfamPF00330. Aconitase. 1 hit.
PF00694. Aconitase_C. 1 hit.
[Graphical view]
PRINTSPR00415. ACONITASE.
SUPFAMSSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit.
SSF53732. Aconitase_N. 1 hit.
TIGRFAMsTIGR01341. Aconitase_1. 1 hit.
PROSITEPS00450. ACONITASE_1. 1 hit.
PS01244. ACONITASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GHX7_SILST
AccessionPrimary (citable) accession number: Q1GHX7
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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