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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

mcpO

Organism
Ruegeria sp. (strain TM1040) (Silicibacter sp.)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Name:mcpOImported
Ordered Locus Names:TM1040_1083Imported
OrganismiRuegeria sp. (strain TM1040) (Silicibacter sp.)Imported
Taxonomic identifieri292414 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
Proteomesi
  • UP000000636 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 31HelicalSequence analysisAdd BLAST20
Transmembranei180 – 206HelicalSequence analysisAdd BLAST27

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi292414.TM1040_1083.

Structurei

3D structure databases

ProteinModelPortaliQ1GHQ0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini208 – 261HAMPInterPro annotationAdd BLAST54
Domaini332 – 561Methyl-accepting transducerInterPro annotationAdd BLAST230

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
OMAiTEAMSEN.
OrthoDBiPOG091H0QRR.

Family and domain databases

InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1GHQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNLSLRKQI FGFAGIFIAM ILIIAAISWF ANQRLAGATY HYRAVSTQSK
60 70 80 90 100
SFDAIKEDIE QGIGDLLSYT VGMPEGLSDL RANIEEIRSE LAVAEDNFKS
110 120 130 140 150
TPIIAARDMQ AYDALVSTEP LLDQLEATLQ EVERTEGEAQ LRVVFDKVFP
160 170 180 190 200
LAGQVRDVVD ALQDKLAATS KSVRAEVDSL ILFCQIIQIA TSVAAALVAV
210 220 230 240 250
TVAFVFGRKL SQPVSDAAQS IAALAKKDYV AEISGTQRGD ELGQIARNLK
260 270 280 290 300
DLRTQLAEAD AHDRQNAAEN ARRVELFGVL GASMSGLKSG DLDQNIVAQD
310 320 330 340 350
WEDLGPGYAT LCEDFNALSS SLSDLVAQLN QSSTVVEQNA REMERMSDQM
360 370 380 390 400
SQRSETQAAT LEESAAALEE MSTAVQSSAA QAKAADREVE EGRRRAEQGG
410 420 430 440 450
EVMAQASRAM ASIAEYSNRI SQIITAIDDI AFQTSLLALN AGVEAARAGE
460 470 480 490 500
AGRGFAVVAS EVRGLAMKAA HSASEIKQLV QESSSQVEEG EQLVQATAET
510 520 530 540 550
LTQIVESVTN VSGMVSAIAS SSSEQAAGIQ EINIGVAQLD KATQENAAMV
560 570 580 590
QETYSASHEM RTQASRLTNL LEGFTGGQAS SSTAAPARAA
Length:590
Mass (Da):62,832
Last modified:June 27, 2006 - v1
Checksum:iE34CF67E3A9EF61D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000377 Genomic DNA. Translation: ABF63816.1.
RefSeqiWP_011538423.1. NC_008044.1.

Genome annotation databases

EnsemblBacteriaiABF63816; ABF63816; TM1040_1083.
KEGGisit:TM1040_1083.
PATRICi23386290. VBIRueSp69653_1970.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000377 Genomic DNA. Translation: ABF63816.1.
RefSeqiWP_011538423.1. NC_008044.1.

3D structure databases

ProteinModelPortaliQ1GHQ0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292414.TM1040_1083.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF63816; ABF63816; TM1040_1083.
KEGGisit:TM1040_1083.
PATRICi23386290. VBIRueSp69653_1970.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
OMAiTEAMSEN.
OrthoDBiPOG091H0QRR.

Family and domain databases

InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ1GHQ0_RUEST
AccessioniPrimary (citable) accession number: Q1GHQ0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: November 2, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.