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Q1GHE5

- RBSA_RUEST

UniProt

Q1GHE5 - RBSA_RUEST

Protein

Ribose import ATP-binding protein RbsA

Gene

rbsA

Organism
Ruegeria sp. (strain TM1040) (Silicibacter sp.)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (27 Jun 2006)
      Previous versions | rss
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    Functioni

    Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system.UniRule annotation

    Catalytic activityi

    ATP + H2O + monosaccharide(Out) = ADP + phosphate + monosaccharide(In).UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi39 – 468ATPUniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-HAMAP
    2. D-ribose transmembrane transporter activity Source: UniProtKB-HAMAP
    3. monosaccharide-transporting ATPase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Sugar transport, Transport

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciRSP292414:GHCT-1208-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribose import ATP-binding protein RbsAUniRule annotation (EC:3.6.3.17UniRule annotation)
    Gene namesi
    Name:rbsAUniRule annotation
    Ordered Locus Names:TM1040_1188
    OrganismiRuegeria sp. (strain TM1040) (Silicibacter sp.)
    Taxonomic identifieri292414 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
    ProteomesiUP000000636: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation

    GO - Cellular componenti

    1. ATP-binding cassette (ABC) transporter complex Source: UniProtKB-HAMAP

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 511511Ribose import ATP-binding protein RbsAPRO_0000261104Add
    BLAST

    Interactioni

    Subunit structurei

    The complex is composed of two ATP-binding proteins (RbsA), two transmembrane proteins (RbsC and RbsD) and a solute-binding protein (RbsB).UniRule annotation

    Protein-protein interaction databases

    STRINGi292414.TM1040_1188.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1GHE5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini7 – 242236ABC transporter 1UniRule annotationAdd
    BLAST
    Domaini256 – 500245ABC transporter 2UniRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. [View classification]UniRule annotation
    Contains 2 ABC transporter domains.UniRule annotation

    Keywords - Domaini

    Repeat

    Phylogenomic databases

    eggNOGiCOG1129.
    KOiK10441.
    OrthoDBiEOG6QK4RR.

    Family and domain databases

    Gene3Di3.40.50.300. 2 hits.
    InterProiIPR003593. AAA+_ATPase.
    IPR003439. ABC_transporter-like.
    IPR017871. ABC_transporter_CS.
    IPR015861. ABC_transpr_RbsA.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF00005. ABC_tran. 2 hits.
    [Graphical view]
    SMARTiSM00382. AAA. 2 hits.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 2 hits.
    PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
    PS50893. ABC_TRANSPORTER_2. 2 hits.
    PS51254. RBSA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1GHE5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTGDVILQIS NLTKSFGPVK ALKGVDFELR RGEIHAIAGE NGAGKSTLMN    50
    IIDGILQPDS GEIRLDGTPV EIPSPAAAQK MGIGFVHQEI ALCPDVSVAE 100
    NIFMAATNSS RSFLMDYKGI EAKAREVFAQ LSSIDPSVLV RDLSISNQQL 150
    VEIAKALTLD CRVLILDEPT AALTEAEAQV LFKIMRRLAD QGISLIYISH 200
    RMVEIFDNCD RVSVFRDGRY VTTQDVAKIT PADVVRAMVG REIGDLYPEK 250
    QRPEACSTTE VLRVENLCEA ERFHDVSFSL HKGEILGFAG LIGAGRSEIA 300
    KGVCALEGQV TGRLWLNGEP LALRDYQDSI DAGIVYLSED RKGDGVFLDM 350
    SIASNVSALK VEQVASALGL IQPGREIEQA DRLGRKLNLK CGTLQDPVSS 400
    LSGGNQQKVA LAKMLSVNPR LIFLDEPTRG VDVGAKAEIY RILRDLAEEG 450
    AGIVVISSEL PELIGLCDRV LVIHEGCLSG EVSGPDMTEE NIMHLASGTQ 500
    QGTGAASVAA Q 511
    Length:511
    Mass (Da):54,981
    Last modified:June 27, 2006 - v1
    Checksum:i95EA57AC99C02712
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000377 Genomic DNA. Translation: ABF63921.1.
    RefSeqiWP_011538528.1. NC_008044.1.
    YP_613183.1. NC_008044.1.

    Genome annotation databases

    EnsemblBacteriaiABF63921; ABF63921; TM1040_1188.
    GeneIDi4077797.
    KEGGisit:TM1040_1188.
    PATRICi23386518. VBIRueSp69653_2082.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000377 Genomic DNA. Translation: ABF63921.1 .
    RefSeqi WP_011538528.1. NC_008044.1.
    YP_613183.1. NC_008044.1.

    3D structure databases

    ProteinModelPortali Q1GHE5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 292414.TM1040_1188.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABF63921 ; ABF63921 ; TM1040_1188 .
    GeneIDi 4077797.
    KEGGi sit:TM1040_1188.
    PATRICi 23386518. VBIRueSp69653_2082.

    Phylogenomic databases

    eggNOGi COG1129.
    KOi K10441.
    OrthoDBi EOG6QK4RR.

    Enzyme and pathway databases

    BioCyci RSP292414:GHCT-1208-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 2 hits.
    InterProi IPR003593. AAA+_ATPase.
    IPR003439. ABC_transporter-like.
    IPR017871. ABC_transporter_CS.
    IPR015861. ABC_transpr_RbsA.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF00005. ABC_tran. 2 hits.
    [Graphical view ]
    SMARTi SM00382. AAA. 2 hits.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 2 hits.
    PROSITEi PS00211. ABC_TRANSPORTER_1. 1 hit.
    PS50893. ABC_TRANSPORTER_2. 2 hits.
    PS51254. RBSA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TM1040.

    Entry informationi

    Entry nameiRBSA_RUEST
    AccessioniPrimary (citable) accession number: Q1GHE5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 28, 2006
    Last sequence update: June 27, 2006
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3