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Q1GHE5 (RBSA_RUEST) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribose import ATP-binding protein RbsA

EC=3.6.3.17
Gene names
Name:rbsA
Ordered Locus Names:TM1040_1188
OrganismRuegeria sp. (strain TM1040) (Silicibacter sp.) [Complete proteome] [HAMAP]
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system By similarity.

Catalytic activity

ATP + H2O + monosaccharide(Out) = ADP + phosphate + monosaccharide(In).

Subunit structure

The complex is composed of two ATP-binding proteins (RbsA), two transmembrane proteins (RbsC and RbsD) and a solute-binding protein (RbsB) Potential.

Subcellular location

Cell inner membrane; Peripheral membrane protein By similarity.

Sequence similarities

Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. [View classification]

Contains 2 ABC transporter domains.

Ontologies

Keywords
   Biological processSugar transport
Transport
   Cellular componentCell inner membrane
Cell membrane
Membrane
   DomainRepeat
   LigandATP-binding
Nucleotide-binding
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentplasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

monosaccharide-transporting ATPase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 511511Ribose import ATP-binding protein RbsA
PRO_0000261104

Regions

Domain7 – 242236ABC transporter 1
Domain256 – 500245ABC transporter 2
Nucleotide binding39 – 468ATP Potential

Sequences

Sequence LengthMass (Da)Tools
Q1GHE5 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 95EA57AC99C02712

FASTA51154,981
        10         20         30         40         50         60 
MTGDVILQIS NLTKSFGPVK ALKGVDFELR RGEIHAIAGE NGAGKSTLMN IIDGILQPDS 

        70         80         90        100        110        120 
GEIRLDGTPV EIPSPAAAQK MGIGFVHQEI ALCPDVSVAE NIFMAATNSS RSFLMDYKGI 

       130        140        150        160        170        180 
EAKAREVFAQ LSSIDPSVLV RDLSISNQQL VEIAKALTLD CRVLILDEPT AALTEAEAQV 

       190        200        210        220        230        240 
LFKIMRRLAD QGISLIYISH RMVEIFDNCD RVSVFRDGRY VTTQDVAKIT PADVVRAMVG 

       250        260        270        280        290        300 
REIGDLYPEK QRPEACSTTE VLRVENLCEA ERFHDVSFSL HKGEILGFAG LIGAGRSEIA 

       310        320        330        340        350        360 
KGVCALEGQV TGRLWLNGEP LALRDYQDSI DAGIVYLSED RKGDGVFLDM SIASNVSALK 

       370        380        390        400        410        420 
VEQVASALGL IQPGREIEQA DRLGRKLNLK CGTLQDPVSS LSGGNQQKVA LAKMLSVNPR 

       430        440        450        460        470        480 
LIFLDEPTRG VDVGAKAEIY RILRDLAEEG AGIVVISSEL PELIGLCDRV LVIHEGCLSG 

       490        500        510 
EVSGPDMTEE NIMHLASGTQ QGTGAASVAA Q 

« Hide

References

[1]"Complete sequence of chromosome of Silicibacter sp. TM1040."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000377 Genomic DNA. Translation: ABF63921.1.
RefSeqYP_613183.1. NC_008044.1.

3D structure databases

ProteinModelPortalQ1GHE5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292414.TM1040_1188.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF63921; ABF63921; TM1040_1188.
GeneID4077797.
KEGGsit:TM1040_1188.
PATRIC23386518. VBIRueSp69653_2082.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1129.
KOK10441.
OrthoDBEOG6QK4RR.
ProtClustDBCLSK881771.

Enzyme and pathway databases

BioCycRSP292414:GHCT-1208-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR015861. ABC_transpr_RbsA.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00005. ABC_tran. 2 hits.
[Graphical view]
SMARTSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMSSF52540. SSF52540. 2 hits.
PROSITEPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 2 hits.
PS51254. RBSA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRBSA_RUEST
AccessionPrimary (citable) accession number: Q1GHE5
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: June 27, 2006
Last modified: April 16, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families