Q1GGN1 (Q1GGN1_SILST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Fumarase EMBL ABF64185.1
EC=4.2.1.2 EMBL ABF64185.1

Gene names

Ordered Locus Names:

TM1040_1452

Organism

Silicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]

Taxonomic identifier

292414 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length	465 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Lyase SAAS SAAS018951 EMBL ABF64185.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	fumarate metabolic process Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Cellular component	tricarboxylic acid cycle enzyme complex Inferred from electronic annotation. Source: InterPro
Molecular function	fumarate hydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1GGN1 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: 70C7D62802E5FD7A	FASTA	465	49,471
	10 20 30 40 50 60 MSNTRTETDS FGPLEVPSDK YWGAQTQRSI MNFPIGWEKQ PVAIVRALGV IKKACAMANK 70 80 90 100 110 120 ASGKLDAKIA DAVIQAAGEV VEGKFDDNFP LVVWQTGSGT QSNMNSNEVI ANRAIEILGG 130 140 150 160 170 180 VIGSKDPVHP NDHCNMGQSS NDTFPTAMHI ATAMSVRDVL VPGLTKLAEG LEAKAEEFKD 190 200 210 220 230 240 IIKIGRTHTQ DATPLTLGQE FGGYAHQIRQ GLARVEAAMP GIYELAQGGT AVGTGLNTVE 250 260 270 280 290 300 GWGEEVAANM AEITGLPFVT APNKFEALAA HDAMVFLSGA LATIAGSCYK IANDIRFLGS 310 320 330 340 350 360 GPRSGLGELI LPENEPGSSI MPGKVNPTQA EALTQVAAHV MGNDAAIKFA GSQGHFELNV 370 380 390 400 410 420 YNPMMSYNLL QSIQLLGDAA DSFTERMLSG IQANEPRIDK LMKESLMLVT ALAPTIGYDN 430 440 450 460 ATTVAKTAHK NGTTLKEEAI KLGFVDEETF DKVVRPEQMI GPKAK

References

[1]

"Complete sequence of chromosome of Silicibacter sp. TM1040." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TM1040.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000377 Genomic DNA. Translation: ABF64185.1.
RefSeq	YP_613447.1. NC_008044.1.
3D structure databases
ProteinModelPortal	Q1GGN1.
SMR	Q1GGN1. Positions 5-460.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1GGN1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4077749.
GenomeReviews	Gene locus TM1040_1452 in contig CP000377_GR.
KEGG	sit:TM1040_1452.
NMPDR	fig|292414.1.peg.3446.
PATRIC	23387066. VBIRueSp69653_2351.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0114.
HOGENOM	HBG284369.
OMA	RIEKDTM.
PhylomeDB	Q1GGN1.
ProtClustDB	PRK00485.
Enzyme and pathway databases
BioCyc	SSP292414:TM1040_1452-MONOMER.
Family and domain databases
HAMAP	MF_00743. FumaraseC. [Tree]
InterPro	IPR003031. D_crystallin. IPR005677. Fum_hydII. IPR018951. Fumarase_C_C. IPR000362. Fumarate_lyase. IPR020557. Fumarate_lyase_CS. IPR008948. L-Aspartase-like. IPR024083. L-Aspartase-like_N. IPR022761. Lyase1_N. [Graphical view]
Gene3D	G3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KO	K01679.
Pfam	PF10415. FumaraseC_C. 1 hit. PF00206. Lyase_1. 1 hit. [Graphical view]
PRINTS	PR00145. ARGSUCLYASE. PR00149. FUMRATELYASE.
SUPFAM	SSF48557. L-Aspartase-like. 1 hit.
TIGRFAMs	TIGR00979. FumC_II. 1 hit.
PROSITE	PS00163. FUMARATE_LYASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1GGN1_SILST

Accession

Primary (citable) accession number: Q1GGN1

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)