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Q1GFF0 (Q1GFF0_SILST) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Betaine aldehyde dehydrogenase EMBL ABF64616.1
Gene names
Ordered Locus Names:TM1040_1883
OrganismSilicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length485 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Betaine aldehyde + NAD+ + H2O = betaine + NADH. SAAS SAAS011264

Pathway

Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway; betaine from betaine aldehyde: step 1/1. SAAS SAAS011264

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Ontologies

Keywords
   LigandNAD SAAS SAAS011264
   Molecular functionOxidoreductase RuleBase RU003344 SAAS SAAS011264
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processbetaine biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionbetaine-aldehyde dehydrogenase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GFF0 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: A212C90AB5CA63E5

FASTA48551,844
        10         20         30         40         50         60 
MTHPAQPKAS HFINGEYVED TSGTPIPVIY AATGETIATV YAATPAIVEQ ALTAAEAAQK 

        70         80         90        100        110        120 
EWAKMSGTER GRVLRRAADI MRERNHELSV LETYDTGKPL QETLVADATS GADALEYFGG 

       130        140        150        160        170        180 
LAGSLTGEHI QLGEDWVYTV REPLGLCVGI GAWNYPTQIA CWKGAPALAC GNAMVFKPSE 

       190        200        210        220        230        240 
TTPLCALKVA EILMEAGAPA GLYNVIQGMG EVGGKLVTDP RVDKVSLTGS VPTGKKVYAA 

       250        260        270        280        290        300 
AAEGMKHVTM ELGGKSPMIV FEDADIESAI SGAINGNFYS SGQVCSNGTR VFVHKDIKEK 

       310        320        330        340        350        360 
FLARLAERTA TAKLGDPMDE SVNFGPMVSE RQMEIVLGYI EKGKSEGARL ICGGNRADMD 

       370        380        390        400        410        420 
GFFVEPTVFA DVKDDMVIAR EEIFGPVMCV LDFESEDEVI ARANDTEFGL SAGVFTKDFT 

       430        440        450        460        470        480 
RAHRVIGQLE AGSCFINSYN DAPVEAPFGG VKASGVGREN SKEAIKHFSQ VKSVYVRMGD 


CEAAF

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References

[1]"Complete sequence of chromosome of Silicibacter sp. TM1040."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000377 Genomic DNA. Translation: ABF64616.1.
RefSeqYP_613878.1. NC_008044.1.

3D structure databases

ProteinModelPortalQ1GFF0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1GFF0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4077380.
GenomeReviewsGene locus TM1040_1883 in contig CP000377_GR.
KEGGsit:TM1040_1883.
NMPDRfig|292414.1.peg.162.
PATRIC23387974. VBIRueSp69653_2800.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1012.
HOGENOMHBG752218.
OMAEPLGLCV.
PhylomeDBQ1GFF0.
ProtClustDBPRK13252.

Enzyme and pathway databases

BioCycSSP292414:TM1040_1883-MONOMER.

Family and domain databases

InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
IPR011264. Betaine_Ald_DH.
[Graphical view]
Gene3DG3DSA:3.40.309.10. Aldehyde_dehydrogenase_C. 1 hit.
G3DSA:3.40.605.10. Aldehyde_dehydrogenase_N. 1 hit.
KOK00130.
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. Aldehyde_DH/Histidinol_DH. 1 hit.
TIGRFAMsTIGR01804. BADH. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GFF0_SILST
AccessionPrimary (citable) accession number: Q1GFF0
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: December 14, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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