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Q1GDT1

- Q1GDT1_RUEST

UniProt

Q1GDT1 - Q1GDT1_RUEST

Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

mcpF

Organism
Ruegeria sp. (strain TM1040) (Silicibacter sp.)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (27 Jun 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. signal transducer activity Source: InterPro

    GO - Biological processi

    1. chemotaxis Source: InterPro

    Enzyme and pathway databases

    BioCyciRSP292414:GHCT-2497-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Methyl-accepting chemotaxis sensory transducerImported
    Gene namesi
    Name:mcpFImported
    Ordered Locus Names:TM1040_2453Imported
    OrganismiRuegeria sp. (strain TM1040) (Silicibacter sp.)Imported
    Taxonomic identifieri292414 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
    ProteomesiUP000000636: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi292414.TM1040_2453.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1GDT1.
    SMRiQ1GDT1. Positions 508-733.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0840.
    HOGENOMiHOG000121981.
    OrthoDBiEOG6PKF80.

    Family and domain databases

    InterProiIPR004090. Chemotax_Me-accpt_rcpt.
    IPR003660. HAMP_linker_domain.
    IPR004089. MCPsignal_dom.
    [Graphical view]
    PfamiPF00672. HAMP. 1 hit.
    PF00015. MCPsignal. 1 hit.
    [Graphical view]
    PRINTSiPR00260. CHEMTRNSDUCR.
    SMARTiSM00304. HAMP. 3 hits.
    SM00283. MA. 1 hit.
    [Graphical view]
    PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    PS50885. HAMP. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1GDT1-1 [UniParc]FASTAAdd to Basket

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    MFRSKNMRIS RKLPLLFAGF CAGTSFLLIA ASLIAFNRFA ERSVQDQMVS    50
    LLADRSYSVR QIISNIETDL VSLSQSPATS SALVAFDEGW EALGPDAQAA 100
    LQTAYITQNR HPSGAKHKLD RAEGEAAYHD AHETFHNGLR TLIEVKGYYD 150
    AFLINPEGDI IYSVFKELDY ATNLSDGKYA QSGLGAAYRA ATKAAEREVV 200
    FADMDPYAPS AGAAAAFLAT PVKGSDGSLI GVIAVQVPVD MLGVITNNSD 250
    GLGKTAQVFL VGADFKARTK SRFDGGFGVL ETLPEVDHIK EALRGETGFS 300
    VGTIGLDGHP VYAASRPLGL ELANWALVVE QDVSDVMAPV RQKAWALVLI 350
    GLAVCTIMSL IGWRIATSIT RPLHQIAVGM DRVASGDVAT TVEEAQRSDE 400
    IGDIGKSLLS LQEDLKVARD AEEQRIEQQR EQEKVVENLS AGLLQLSQGD 450
    FSATIDTPFS GEHETLRADF NKTVTTLNET LGHVVTAVSR IRNGAAEINQ 500
    SSNDLSHRTE SQAATLEETA AALEEMTASV KSAADSARSV ETITGEAKQE 550
    AEASGKVVQN AVTAMTEIEE SSKQIAQIIL VIDDIAFQTN LLALNAGVEA 600
    ARAGEAGRGF AVVASEVRAL AQRSSDAAME IKTLIGESSK QVESGVDLVG 650
    KAGEALNMIV ERVNNIAQLV SGIAEGASEQ SNGIEEINTG MVQLDQVTQQ 700
    NAAMVEEASA ACQMLDTDAS ELGGVVAKFK LSGQTAQNTP TTSTAVSSAA 750
    ASDSWDLDAE TDETPMAPTA HGVPTSNGNA AYNFYEDF 788
    Length:788
    Mass (Da):83,579
    Last modified:June 27, 2006 - v1
    Checksum:iEF4639C6AF614361
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000377 Genomic DNA. Translation: ABF65185.1.
    RefSeqiWP_011539772.1. NC_008044.1.
    YP_614447.1. NC_008044.1.

    Genome annotation databases

    EnsemblBacteriaiABF65185; ABF65185; TM1040_2453.
    GeneIDi4076935.
    KEGGisit:TM1040_2453.
    PATRICi23389174. VBIRueSp69653_3391.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000377 Genomic DNA. Translation: ABF65185.1 .
    RefSeqi WP_011539772.1. NC_008044.1.
    YP_614447.1. NC_008044.1.

    3D structure databases

    ProteinModelPortali Q1GDT1.
    SMRi Q1GDT1. Positions 508-733.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 292414.TM1040_2453.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABF65185 ; ABF65185 ; TM1040_2453 .
    GeneIDi 4076935.
    KEGGi sit:TM1040_2453.
    PATRICi 23389174. VBIRueSp69653_3391.

    Phylogenomic databases

    eggNOGi COG0840.
    HOGENOMi HOG000121981.
    OrthoDBi EOG6PKF80.

    Enzyme and pathway databases

    BioCyci RSP292414:GHCT-2497-MONOMER.

    Family and domain databases

    InterProi IPR004090. Chemotax_Me-accpt_rcpt.
    IPR003660. HAMP_linker_domain.
    IPR004089. MCPsignal_dom.
    [Graphical view ]
    Pfami PF00672. HAMP. 1 hit.
    PF00015. MCPsignal. 1 hit.
    [Graphical view ]
    PRINTSi PR00260. CHEMTRNSDUCR.
    SMARTi SM00304. HAMP. 3 hits.
    SM00283. MA. 1 hit.
    [Graphical view ]
    PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
    PS50885. HAMP. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TM1040Imported.

    Entry informationi

    Entry nameiQ1GDT1_RUEST
    AccessioniPrimary (citable) accession number: Q1GDT1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 27, 2006
    Last sequence update: June 27, 2006
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3