Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q1GDT1 (Q1GDT1_RUEST) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:mcpF EMBL ABF65185.1
Ordered Locus Names:TM1040_2453 EMBL ABF65185.1
OrganismRuegeria sp. (strain TM1040) (Silicibacter sp.) [Complete proteome] [HAMAP] EMBL ABF65185.1
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length788 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1GDT1 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: EF4639C6AF614361

FASTA78883,579
        10         20         30         40         50         60 
MFRSKNMRIS RKLPLLFAGF CAGTSFLLIA ASLIAFNRFA ERSVQDQMVS LLADRSYSVR 

        70         80         90        100        110        120 
QIISNIETDL VSLSQSPATS SALVAFDEGW EALGPDAQAA LQTAYITQNR HPSGAKHKLD 

       130        140        150        160        170        180 
RAEGEAAYHD AHETFHNGLR TLIEVKGYYD AFLINPEGDI IYSVFKELDY ATNLSDGKYA 

       190        200        210        220        230        240 
QSGLGAAYRA ATKAAEREVV FADMDPYAPS AGAAAAFLAT PVKGSDGSLI GVIAVQVPVD 

       250        260        270        280        290        300 
MLGVITNNSD GLGKTAQVFL VGADFKARTK SRFDGGFGVL ETLPEVDHIK EALRGETGFS 

       310        320        330        340        350        360 
VGTIGLDGHP VYAASRPLGL ELANWALVVE QDVSDVMAPV RQKAWALVLI GLAVCTIMSL 

       370        380        390        400        410        420 
IGWRIATSIT RPLHQIAVGM DRVASGDVAT TVEEAQRSDE IGDIGKSLLS LQEDLKVARD 

       430        440        450        460        470        480 
AEEQRIEQQR EQEKVVENLS AGLLQLSQGD FSATIDTPFS GEHETLRADF NKTVTTLNET 

       490        500        510        520        530        540 
LGHVVTAVSR IRNGAAEINQ SSNDLSHRTE SQAATLEETA AALEEMTASV KSAADSARSV 

       550        560        570        580        590        600 
ETITGEAKQE AEASGKVVQN AVTAMTEIEE SSKQIAQIIL VIDDIAFQTN LLALNAGVEA 

       610        620        630        640        650        660 
ARAGEAGRGF AVVASEVRAL AQRSSDAAME IKTLIGESSK QVESGVDLVG KAGEALNMIV 

       670        680        690        700        710        720 
ERVNNIAQLV SGIAEGASEQ SNGIEEINTG MVQLDQVTQQ NAAMVEEASA ACQMLDTDAS 

       730        740        750        760        770        780 
ELGGVVAKFK LSGQTAQNTP TTSTAVSSAA ASDSWDLDAE TDETPMAPTA HGVPTSNGNA 


AYNFYEDF 

« Hide

References

[1]"Complete sequence of chromosome of Silicibacter sp. TM1040."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000377 Genomic DNA. Translation: ABF65185.1.
RefSeqYP_614447.1. NC_008044.1.

3D structure databases

ProteinModelPortalQ1GDT1.
SMRQ1GDT1. Positions 508-733.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292414.TM1040_2453.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF65185; ABF65185; TM1040_2453.
GeneID4076935.
KEGGsit:TM1040_2453.
PATRIC23389174. VBIRueSp69653_3391.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000121981.
OrthoDBEOG6PKF80.

Enzyme and pathway databases

BioCycRSP292414:GHCT-2497-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GDT1_RUEST
AccessionPrimary (citable) accession number: Q1GDT1
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)