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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

mcpF

Organism
Ruegeria sp. (strain TM1040) (Silicibacter sp.)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRSP292414:GHCT-2497-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Name:mcpFImported
Ordered Locus Names:TM1040_2453Imported
OrganismiRuegeria sp. (strain TM1040) (Silicibacter sp.)Imported
Taxonomic identifieri292414 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
ProteomesiUP000000636 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi292414.TM1040_2453.

Structurei

3D structure databases

ProteinModelPortaliQ1GDT1.
SMRiQ1GDT1. Positions 508-733.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000121981.
OMAiKWAILTE.
OrthoDBiEOG6PKF80.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1GDT1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFRSKNMRIS RKLPLLFAGF CAGTSFLLIA ASLIAFNRFA ERSVQDQMVS
60 70 80 90 100
LLADRSYSVR QIISNIETDL VSLSQSPATS SALVAFDEGW EALGPDAQAA
110 120 130 140 150
LQTAYITQNR HPSGAKHKLD RAEGEAAYHD AHETFHNGLR TLIEVKGYYD
160 170 180 190 200
AFLINPEGDI IYSVFKELDY ATNLSDGKYA QSGLGAAYRA ATKAAEREVV
210 220 230 240 250
FADMDPYAPS AGAAAAFLAT PVKGSDGSLI GVIAVQVPVD MLGVITNNSD
260 270 280 290 300
GLGKTAQVFL VGADFKARTK SRFDGGFGVL ETLPEVDHIK EALRGETGFS
310 320 330 340 350
VGTIGLDGHP VYAASRPLGL ELANWALVVE QDVSDVMAPV RQKAWALVLI
360 370 380 390 400
GLAVCTIMSL IGWRIATSIT RPLHQIAVGM DRVASGDVAT TVEEAQRSDE
410 420 430 440 450
IGDIGKSLLS LQEDLKVARD AEEQRIEQQR EQEKVVENLS AGLLQLSQGD
460 470 480 490 500
FSATIDTPFS GEHETLRADF NKTVTTLNET LGHVVTAVSR IRNGAAEINQ
510 520 530 540 550
SSNDLSHRTE SQAATLEETA AALEEMTASV KSAADSARSV ETITGEAKQE
560 570 580 590 600
AEASGKVVQN AVTAMTEIEE SSKQIAQIIL VIDDIAFQTN LLALNAGVEA
610 620 630 640 650
ARAGEAGRGF AVVASEVRAL AQRSSDAAME IKTLIGESSK QVESGVDLVG
660 670 680 690 700
KAGEALNMIV ERVNNIAQLV SGIAEGASEQ SNGIEEINTG MVQLDQVTQQ
710 720 730 740 750
NAAMVEEASA ACQMLDTDAS ELGGVVAKFK LSGQTAQNTP TTSTAVSSAA
760 770 780
ASDSWDLDAE TDETPMAPTA HGVPTSNGNA AYNFYEDF
Length:788
Mass (Da):83,579
Last modified:June 27, 2006 - v1
Checksum:iEF4639C6AF614361
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000377 Genomic DNA. Translation: ABF65185.1.
RefSeqiWP_011539772.1. NC_008044.1.

Genome annotation databases

EnsemblBacteriaiABF65185; ABF65185; TM1040_2453.
KEGGisit:TM1040_2453.
PATRICi23389174. VBIRueSp69653_3391.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000377 Genomic DNA. Translation: ABF65185.1.
RefSeqiWP_011539772.1. NC_008044.1.

3D structure databases

ProteinModelPortaliQ1GDT1.
SMRiQ1GDT1. Positions 508-733.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi292414.TM1040_2453.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABF65185; ABF65185; TM1040_2453.
KEGGisit:TM1040_2453.
PATRICi23389174. VBIRueSp69653_3391.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000121981.
OMAiKWAILTE.
OrthoDBiEOG6PKF80.

Enzyme and pathway databases

BioCyciRSP292414:GHCT-2497-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 3 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TM1040Imported.

Entry informationi

Entry nameiQ1GDT1_RUEST
AccessioniPrimary (citable) accession number: Q1GDT1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: July 22, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.