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Q1GDM2 (Q1GDM2_RUEST) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:TM1040_2512 EMBL ABF65244.1
OrganismRuegeria sp. (strain TM1040) (Silicibacter sp.) [Complete proteome] [HAMAP] EMBL ABF65244.1
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length327 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1GDM2 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 0DE248D3FEB796DA

FASTA32735,884
        10         20         30         40         50         60 
MHDRITRKLT TILAADAEQF SAAMTTDEVG TYTELQSARD VFFKLIERHG GRVANTAGDG 

        70         80         90        100        110        120 
LIADFPSVVE AVQCAIEVQQ ELAAKDSALS FRIGVNLGDV ICDGEDLIGE GVNLAARLQT 

       130        140        150        160        170        180 
MAEPGGVLIS QQVYDHVKNK LSIGFEYLGD RRPRNLPEDV AVYRISLGAP RPSRASHPRS 

       190        200        210        220        230        240 
SAQVWSDPDP FADAPQRDYG LTDDAEDPEE VPLRGLDRLV GRRLPLSKRS KTLVLVAAGL 

       250        260        270        280        290        300 
FVIDLASGRG IWAHWPLLVI AMVIGLRDGP RLLGRTEFRG IPVKLCVIAA FLLLVNLFSW 

       310        320 
QGVMWSLWPI GGMAAYSLLK RRWSEAE 

« Hide

References

[1]"Complete sequence of chromosome of Silicibacter sp. TM1040."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000377 Genomic DNA. Translation: ABF65244.1.
RefSeqYP_614506.1. NC_008044.1.

3D structure databases

ProteinModelPortalQ1GDM2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292414.TM1040_2512.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF65244; ABF65244; TM1040_2512.
GeneID4076514.
KEGGsit:TM1040_2512.
PATRIC23389296. VBIRueSp69653_3452.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2114.
HOGENOMHOG000272372.
OrthoDBEOG6N945G.
ProtClustDBCLSK806299.

Enzyme and pathway databases

BioCycRSP292414:GHCT-2557-MONOMER.

Family and domain databases

Gene3D3.30.70.1230. 1 hit.
InterProIPR001054. A/G_cyclase.
[Graphical view]
PfamPF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTSM00044. CYCc. 1 hit.
[Graphical view]
SUPFAMSSF55073. SSF55073. 1 hit.
PROSITEPS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GDM2_RUEST
AccessionPrimary (citable) accession number: Q1GDM2
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: November 13, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)