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Q1GDB5 (Q1GDB5_RUEST) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:TM1040_2619 EMBL ABF65351.1
OrganismRuegeria sp. (strain TM1040) (Silicibacter sp.) [Complete proteome] [HAMAP] EMBL ABF65351.1
Taxonomic identifier292414 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length381 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1GDB5 [UniParc].

Last modified June 27, 2006. Version 1.
Checksum: 6B4C7AD2FEE6812E

FASTA38142,063
        10         20         30         40         50         60 
MRRFCEELVN HGVPLLRMQL SQRALHPEFG GIGFTWTRQD GLNSEYFERV DHKEPRNEWV 

        70         80         90        100        110        120 
QSPFFALISS GEAEYYSRFS REDEARFPIF TRLKEMGATS YFAHWQPFGD FSQAQFDPDS 

       130        140        150        160        170        180 
PNAEGLVASW SFDGPPEEAE PCLALLRNVF GTLALVLAAA GNREMGRALL QVYLGRDAGA 

       190        200        210        220        230        240 
RVLSGEIARG SSQRIDAVIC LFDLRGFTAL SESLPGEELV DLLNDYFGHV VQLIQSHGGN 

       250        260        270        280        290        300 
ILKFMGDAVM AMFNLGTLQE DAQAALRAVA ELGPRMRAVN EVRAAEGLPL AEYTMALHAG 

       310        320        330        340        350        360 
EILYGNIGAP NRLDFTVIGP AVNLTARIAD MHRAVERSII LSEDVRDAAG ADGADLVSVG 

       370        380 
RYMLRGVAEP IELFTLYQPE T 

« Hide

References

[1]"Complete sequence of chromosome of Silicibacter sp. TM1040."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P.
Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TM1040.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000377 Genomic DNA. Translation: ABF65351.1.
RefSeqYP_614613.1. NC_008044.1.

3D structure databases

ProteinModelPortalQ1GDB5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING292414.TM1040_2619.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABF65351; ABF65351; TM1040_2619.
GeneID4077922.
KEGGsit:TM1040_2619.
PATRIC23389516. VBIRueSp69653_3562.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2114.
HOGENOMHOG000271557.
KOK01768.
OrthoDBEOG6ZH2D0.
ProtClustDBCLSK751506.

Enzyme and pathway databases

BioCycRSP292414:GHCT-2664-MONOMER.

Family and domain databases

Gene3D3.30.70.1230. 1 hit.
InterProIPR001054. A/G_cyclase.
[Graphical view]
PfamPF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTSM00044. CYCc. 1 hit.
[Graphical view]
SUPFAMSSF55073. SSF55073. 1 hit.
PROSITEPS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1GDB5_RUEST
AccessionPrimary (citable) accession number: Q1GDB5
Entry history
Integrated into UniProtKB/TrEMBL: June 27, 2006
Last sequence update: June 27, 2006
Last modified: November 13, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)