Q1GCR6 (Q1GCR6_SILST) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ABC transporter periplasmic binding protein thiB subfamily EMBL ABF65550.1

Gene names

Ordered Locus Names:

TM1040_2818

Organism

Silicibacter sp. (strain TM1040) [Complete proteome] [HAMAP]

Taxonomic identifier

292414 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length	326 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	outer membrane-bounded periplasmic space Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro ATPase activity, coupled to transmembrane movement of substances Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1GCR6 [UniParc]. Last modified June 27, 2006. Version 1. Checksum: DF7DE2267569912D	FASTA	326	34,861
	10 20 30 40 50 60 MKSLIFASAT CLATAVAAAD TPELVVYTYD SFVSEWGPGP AVEEAFEAVC GCDLKFVGAG 70 80 90 100 110 120 DGAALLARIK LEGARSDADV VLGLDTNLTA AAKETGLFAP VSVEADYALP ITWSDTHFAP 130 140 150 160 170 180 YDWGYFAFVH NADVPAPSNF EALADSDLKI VIQDPRSSTP GLGLLMWVKA AYGEDAPALW 190 200 210 220 230 240 EGLSDNIVTV TKGWSEAYGL FLEGEADMVL SYTTSPAYHL IAEEDDSKSA ALFDEGHYMQ 250 260 270 280 290 300 VEVAGKLAAS DESALADQFL EFMVSDAFQS IIPTTNWMYP AVTPDSGLPQ GFETLISPEK 310 320 SLLLPEDEAA ALRAEALEEW RAALSR

References

[1]

"Complete sequence of chromosome of Silicibacter sp. TM1040." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F., Richardson P. Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TM1040.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000377 Genomic DNA. Translation: ABF65550.1.
RefSeq	YP_614812.1. NC_008044.1.
3D structure databases
ProteinModelPortal	Q1GCR6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1GCR6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4076637.
GenomeReviews	Gene locus TM1040_2818 in contig CP000377_GR.
KEGG	sit:TM1040_2818.
NMPDR	fig|292414.1.peg.1722.
PATRIC	23389930. VBIRueSp69653_3767.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4143.
HOGENOM	HBG476839.
OMA	IPTTNWM.
PhylomeDB	Q1GCR6.
ProtClustDB	PRK11205.
Enzyme and pathway databases
BioCyc	SSP292414:TM1040_2818-MONOMER.
Family and domain databases
InterPro	IPR006059. Solute-bd_1_bac. IPR005948. Thi_ABC_peri-bd. IPR005967. ThiB_ABC_peri-bd. [Graphical view]
KO	K02064.
Pfam	PF01547. SBP_bac_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR01254. SfuA. 1 hit. TIGR01276. ThiB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1GCR6_SILST

Accession

Primary (citable) accession number: Q1GCR6

Entry history

Integrated into UniProtKB/TrEMBL:	June 27, 2006
Last sequence update:	June 27, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)